Silurus meridionalis (southern catfish): 124397584
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Entry
124397584 CDS
T08004
Symbol
ppp2r5d
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03015
mRNA surveillance pathway
smeo04110
Cell cycle
smeo04114
Oocyte meiosis
smeo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124397584 (ppp2r5d)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124397584 (ppp2r5d)
04114 Oocyte meiosis
124397584 (ppp2r5d)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
124397584 (ppp2r5d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124397584 (ppp2r5d)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124397584 (ppp2r5d)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124397584 (ppp2r5d)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
124397584 (ppp2r5d)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124397584 (ppp2r5d)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124397584 (ppp2r5d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
124397584
NCBI-ProteinID:
XP_046723091
LinkDB
All DBs
Position
2:complement(24520035..24542834)
Genome browser
AA seq
605 aa
AA seq
DB search
MPNKTKKEKESPKSVKASSKNSNVNAGKDPGTENSDEAQQQTASKRPSNSTPPPTQLNKI
KYSGGPQIVKKERRQSSSRFNLSKNRELQKLPALKDAPTIDREELFVQKLRQCCVLFDFV
TDPLSDLKYKEVKRAGLNEMVEYITHNRDVVTECIYPEAVLMFSMNLFRTLPPSSNPTGA
EFDPEEDEPTLEAAWPHLQLVYEFFLRFLESADFQPNIAKKYIDQKFVLSLLELFDSEDP
RERDFLKTILHRIYGKFLGLRAYIRRQINNIFYRFIYETEHHNGIAELLEILGSIINGFA
LPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSSLTEPVIMGLLKFWPKT
HSPKEVMFLNELEEILDVIEPSEFVKVMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIM
SLISDNAAKILPIMFPALYKNSKSHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQYKAEK
QKEKYKVKEREEIWHKIEHLAKQNPQIVKIHPSLRPGLPQDAYIIYNENQGIPHYSMETE
TPTAEDIQLLKKTVESEATQGMKDIKKDKVLMRRKSELPQDVYTIKALESHKRAEEYLTA
NQEAL
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgccgaataaaacgaaaaaggaaaaggaatcgccaaaatctgtgaaagccagcagcaaa
aacagtaacgtcaatgctggaaaagatcctgggactgaaaactcggatgaggcgcagcag
cagacagccagcaagcgtcccagcaacagcactccacctccaactcagctcaacaaaatc
aagtactcaggtggtccacagattgtgaagaaagagcgtcgacagagctcttcacgcttt
aacctcagcaagaatcgtgaactgcagaagctccctgcccttaaagatgccccaactatc
gacagagaggagctgtttgtacagaagctgcgccagtgctgtgtactgtttgactttgtg
actgatcctctcagtgatctcaaatacaaggaggtgaaacgtgccggactgaatgagatg
gtggagtacatcacacacaatcgtgatgtagttactgaatgcatctatcctgaggctgtt
cttatgttttcgatgaacctatttaggaccctgcctccttcttccaatcccactggagca
gaatttgatcctgaggaggatgaacctacactggaggcagcttggcctcacctgcagctg
gtgtatgaattcttcttacggttcttggagtctgctgatttccagcctaatattgccaaa
aaatacatcgaccaaaagtttgtattgtctctcctggagctgtttgacagtgaagacccc
agagagagggactttttgaaaacaattctacacagaatttatggcaagtttctgggactc
agagcgtacatccggcgacagatcaacaacattttctataggtttatatatgaaacagag
catcacaatgggattgcagaactcttggaaattctaggaagtataattaatggttttgct
ctgccattaaaagaggagcacaaaatgttcttgatccgagtgctcctgccattgcacaag
gtcaagtcactcagtgtctatcaccctcagctggcatactgtgttgttcagtttctagaa
aaagacagcagtctcactgaaccagttattatgggtctcttgaagttctggcccaagaca
catagtcctaaagaggtgatgtttctgaatgagttggaagaaatcctggatgtcattgag
ccttcagagtttgtaaaagttatggagcctctgtttagacagctagccaagtgtgtttca
agtcctcactttcaggttgcagagagggcattgtattactggaacaacgagtatatcatg
agtctgatcagtgacaatgcagccaaaatcctccccatcatgtttcctgctctttataag
aactccaaaagtcattggaacaagacaatccatgggcttatttacaatgctctaaagctc
tttatggagatgaaccagaagctgtttgatgattgcactcagcagtacaaagccgagaag
caaaaggagaagtataaagttaaggagcgggaagagatctggcacaagattgaacacctt
gctaaacaaaatcctcagattgtgaagatccatcctagtctccgacctggtctgcctcag
gatgcgtatataatatataatgaaaaccaagggataccacactattccatggagaccgag
actcccactgctgaggacatccagctgctgaagaagaccgtggaatctgaggccacacag
ggaatgaaggatataaaaaaggacaaggtgctgatgcgacggaagtcagagctgccacaa
gatgtgtacactataaaggctctggagtcccacaagcgggcagaagagtacctgaccgct
aatcaggaagccctctga
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