Silurus meridionalis (southern catfish): 124397588
Help
Entry
124397588 CDS
T08004
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
smeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124397588 (gabra1)
04082 Neuroactive ligand signaling
124397588 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124397588 (gabra1)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
GABA-A
124397588 (gabra1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
124397588
NCBI-ProteinID:
XP_046723097
LinkDB
All DBs
Position
15:complement(461608..502502)
Genome browser
AA seq
456 aa
AA seq
DB search
MMWARLGATWIWAWLLVVDVLGKSSNQNGSDEQKDNTTVFTRILDSLLDGYDNRLRPGLG
ERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMASKIW
TPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAHACPL
KFGSYAYTRAEVVYVWTRGAAQSVVVAEDGSRLNQYDLMGQTVDSGVVQSSTGEYVVMLT
HFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARN
SLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKKESLL
KKNNTYTAATATTFAPNIARDPGLATIAKSAPPPPTEPKEEPKPKPAEAKKTFNSVSKID
RIARIAFPLLFGTFNLVYWATYLNKKPKIQDALTPH
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgggctcgactgggagccacgtggatctgggcatggttattggtggtcgatgtt
ctgggcaagagctccaatcagaatggatcagatgagcagaaggacaacaccactgtcttc
actcgcatcctggacagtctgctggatggctacgataaccgtctcaggccggggctgggg
gagcgagtgactgaggtgaagaccgacatcttcgtgacgagtatcggccccgtctccgac
cacgacatggaatacactatagacgtgttcttcagacagagctggaaagatgagcgtttg
aagtttaaagggccaatggctgtgctacgtctcaacaacctgatggccagtaagatctgg
acgcctgacacctttttccacaatggcaagaaatccgtcgctcacaacatgactatgccc
aacaaactgctgcgcatcactgaggagggaaccctgctctacaccatgaggttgacggtg
agagctgagtgccccatgcacttggaggattttcccatggatgctcacgcctgtccactc
aaattcggaagctatgcgtatacgcgggcagaggtggtgtatgtgtggacgaggggagcg
gctcagtcggtggtggtggctgaagacgggtctcggctgaatcagtatgacctgatgggg
cagacggtggactcaggagtggttcagtccagcactggcgagtacgttgtcatgttgacg
cacttccacctgaaaaggaagatcggctactttgtcattcagacgtatctgccgtgcatc
atgaccgtcatcctgtcacaggtttccttctggctcaacagagaatccgttcctgctagg
actgtgttcggagtgaccaccgtcctgaccatgaccactctgagtatcagtgccagaaac
tctctacccaaagtggcctacgccaccgccatggactggttcatcgccgtctgctacgcc
ttcgtgttctccgccctcatcgaattcgccactgtcaactacttcacgaagagaggttat
gcctgggacggcaagagcgtcgtacctgaaaagcaaaagaagaaaaaagagtctctcctg
aagaagaacaacacctacacggctgccacggcaaccactttcgcccccaacatcgctaga
gatccaggactagcgaccatcgccaaaagtgcacctcctccaccaaccgagccgaaagaa
gagccgaaacccaaaccggctgaggcgaaaaaaaccttcaacagcgtgagcaaaattgac
cggatcgccagaatagcatttcctctactgtttggtacctttaacctggtctactgggcc
acttacctgaataaaaaacccaaaattcaagatgctctcacaccccactaa
DBGET
integrated database retrieval system
