Silurus meridionalis (southern catfish): 124397590
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Entry
124397590 CDS
T08004
Symbol
gabra6b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
smeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124397590 (gabra6b)
04082 Neuroactive ligand signaling
124397590 (gabra6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124397590 (gabra6b)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
GABA-A
124397590 (gabra6b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
DUF2070
Motif
Other DBs
NCBI-GeneID:
124397590
NCBI-ProteinID:
XP_046723101
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Position
15:complement(505302..519571)
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AA seq
443 aa
AA seq
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MALIHTLILLSCAGKVWSKSDPNDSQVYLDNITRILDRLLDGYDNRLRPGFGGPVTEVKT
DIFVTSFGPVSDVEMEYTMDVFFRQTWVDKRLRFEGPIEILRLNNLMVSKIWTPDTFFRN
GKRSIAHNMTTPNKLFRIMQNGTILYTMRLTINAECPMKLINFPMDGHSCPLKFGSYAYP
MSEIVYTWKKGPLVSVEVPQESSSLLQYDLIGQTVSSEKLKSNTGEYIIMTVHFHLQRKM
GFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYA
TAMDWFIAVCFAFVFSALIEFAAVNYFSTVQANQERRRANVARAAMATPAKSDAMEVTAL
VDPSSVLKKRLNSVPQKEILVVPASPVPDVHQQGSATPANDMLTGTSIIDKYSRILFPLS
FGAFNLVYWIVYLTKDPMEARDE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggctctcatacacactctcatactgctctcatgcgccgggaaagtttggtccaaatct
gacccgaacgactctcaggtctatctggacaacatcacacggattctggaccggttactg
gatggatacgacaacagactacgaccaggatttggaggtcctgttacggaagtaaagacg
gacatctttgtcaccagcttcggtcccgtgtctgatgtggaaatggaatacaccatggac
gtgtttttccgtcagacgtgggtagacaagcgtctgcgcttcgagggtcccatcgagatc
ctgcgtctcaacaacctgatggtcagcaagatctggactccggatacgtttttccgaaac
ggcaaacgctccatcgctcacaacatgacgactcccaacaagctgttccgcatcatgcag
aacggaaccatcctctacaccatgagattaaccatcaatgctgaatgtcccatgaagctc
ataaacttccccatggatggacactcctgtcctctgaagttcggcagctacgcctacccc
atgagtgagatagtgtacacttggaagaaagggcccttggtgtctgtggaggtgccacag
gagtcgtccagcctgctgcagtacgatctgattggtcagacggtgtccagcgagaagctc
aagtccaacaccggtgaatacatcatcatgactgttcactttcatctgcagagaaagatg
ggtttcttcctgattcagacctacatcccctgtatcatgaccgtcatcctcgctcaggtc
tccttctggattaacaaagagtcagttcctgcaagaaccgtctttggcatcactacagtg
ctaacaatgacgactctgagtattagcgctcgacactcactgcctaaagtctcctacgcc
actgcaatggactggtttatcgctgtctgcttcgccttcgtcttctccgccctcatcgaa
ttcgctgcagtcaactacttctccaccgtgcaggccaaccaagagcgtcgccgtgccaac
gtcgctcgagctgccatggcaacccctgccaagagtgatgccatggaagttacggctctg
gtggatcccagcagtgttcttaagaaaaggctgaactctgtaccacagaaggagatcctc
gtggttcctgcgagtccagtgcctgatgtacatcagcagggttcagccacgcccgctaac
gatatgctaactggcaccagcatcatcgataaatactcacgcatcctcttccctctgtcc
ttcggtgcctttaacctcgtttactggatcgtttacctcaccaaggaccccatggaggca
agggacgagtga
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