KEGG   Silurus meridionalis (southern catfish): 124397616
Entry
124397616         CDS       T08004                                 
Symbol
snrpd3l
Name
(RefSeq) small nuclear ribonucleoprotein D3 polypeptide, like
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124397616 (snrpd3l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smeo03019]
    124397616 (snrpd3l)
   03041 Spliceosome [BR:smeo03041]
    124397616 (snrpd3l)
   03032 DNA replication proteins [BR:smeo03032]
    124397616 (snrpd3l)
Messenger RNA biogenesis [BR:smeo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     124397616 (snrpd3l)
Spliceosome [BR:smeo03041]
 Complex A
  U1 snRNP components
   Sm proteins
    124397616 (snrpd3l)
  U2 snRNP components
    124397616 (snrpd3l)
 Complex B
  U1 snRNP components
    124397616 (snrpd3l)
  U4/U6.U5 tri-snRNP components
    124397616 (snrpd3l)
 Complex C
  U2 snRNP components
    124397616 (snrpd3l)
DNA replication proteins [BR:smeo03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     124397616 (snrpd3l)
SSDB
Motif
Pfam: LSM TSP9 Kringle ATP-grasp_2
Other DBs
NCBI-GeneID: 124397616
NCBI-ProteinID: XP_046723137
LinkDB
Position
15:complement(13674020..13677929)
AA seq 128 aa
MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSVKNKNQGAGAGRGKAAILKAQVAARGRGRGGPGGR
GNIFQKRR
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtctatcggagtccccattaaagttctgcatgaagctgaaggtcacatcgtcacctgt
gagaccaacacgggagaagtttaccgaggtaaactcatcgaagcagaggacaacatgaac
tgtcagatgtccaatatcacggtgacgtatcgcgatggccgagtggcacagctggagcag
gtttatatccgtggcagtaagattcgcttcctcatcctgccagacatgctaaagaatgct
ccaatgttgaagagtgtgaagaataagaaccagggagctggagctggcaggggcaaagct
gccattcttaaagctcaagtggctgcgagaggtcgaggccggggtggcccaggaggacga
ggaaacatcttccagaaaagacgatag

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