Silurus meridionalis (southern catfish): 124397622
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Entry
124397622 CDS
T08004
Symbol
rnf165a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF165 isoform X1
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124397622 (rnf165a)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124397622 (rnf165a)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124397622 (rnf165a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
U-box_ZFPL1
zf-ANAPC11
zf-RING_Vps41
Prok-RING_4
zf-RING_4
zf-Nse
zf-RING_16
RINGv
zf-RING-like
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
124397622
NCBI-ProteinID:
XP_046723164
LinkDB
All DBs
Position
15:complement(7623902..7642630)
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AA seq
308 aa
AA seq
DB search
MVLVHVGYLVLPVFGSVRSRGTHFSRNQHSHATSCRHFHLATPLSTEFPPTGLAAPQYQE
VPPTFLPQALQQQYLIQQQLLQRRRTQDRVPINTHRLRPGYDYSPPMHIPQPMTQQPRYL
AEGTDWDLSVDAGLSHQYSLQQIPQPYQHYIASPRMHHFPRNTSSTQVVVHEVRNYPYPQ
LHLLALQSLSPSRHASAVRESYEELLQLEDRLGSVSRGAIQTTIERFTFPHKYKKRKPLE
MKLYDDEEESDVDEKCTICLSMLEDGEDVRRLPCMHLFHQVCVDQWLATSRKCPICRVDI
QTQLTPES
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagttcatgtcggatatctggttcttcccgtgtttggttcagtaagaagcaga
ggtactcatttcagcaggaaccaacacagccatgctacgtcctgccgacatttccacctg
gccacaccactttctactgagttcccgccaactggccttgcggccccacaataccaggaa
gtcccacccactttcctacctcaggccttacagcagcaatacctcatacagcagcagcta
ctgcagcgcagacgcacacaagatcgagttcccatcaacacacaccggttacgcccagga
tatgattattccccgcccatgcacattcctcagccaatgacacaacagcccagatacttg
gcagagggcacagactgggatctgagtgtggatgctggtttgtcacatcagtactcgctg
cagcagattccacagccctaccagcactacatcgcctctcctagaatgcaccactttcca
cggaatacttcgtctacgcaagtggttgtccatgaggtaaggaattatccatatccccag
ctgcacctactggctttgcagagtttaagccccagtcgacatgcttctgctgtacgagag
agttatgaggagctgcttcagctggaggatcggttgggtagtgtgagccgaggagccatc
cagaccaccattgagaggtttactttccctcacaagtacaagaagaggaagccgttggag
atgaagttgtatgatgatgaggaggagtctgacgtagatgagaaatgcaccatctgtctc
tccatgcttgaggatggcgaggatgtcagacgattgccctgcatgcacctcttccatcag
gtgtgtgtggatcagtggttggccaccagcaggaagtgtcccatatgcagagtggacatc
cagacacaactcacacctgagagctga
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