Silurus meridionalis (southern catfish): 124397633
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Entry
124397633 CDS
T08004
Symbol
skp2
Name
(RefSeq) S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04068
FoxO signaling pathway
smeo04110
Cell cycle
smeo04120
Ubiquitin mediated proteolysis
smeo04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124397633 (skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
124397633 (skp2)
04150 mTOR signaling pathway
124397633 (skp2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124397633 (skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124397633 (skp2)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124397633 (skp2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
LRR_NXF1-5
LRR_FBXL18
LRR_R13L1-DRL21
LRR_8
LRR_4
LARA_dom
LRR_9
Motif
Other DBs
NCBI-GeneID:
124397633
NCBI-ProteinID:
XP_046723187
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Position
15:complement(14713927..14721143)
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AA seq
411 aa
AA seq
DB search
MSAERPLQELPCLSENLDGSLLCMSQSKAKKRPCVYGEGLQSENTPHELIQHWSPPRKQP
RPCAKGKENGFVLARRPRRSRDAAGVLCWDTLPDELLLGIFSRLSLQDLLRTSRVCKRWH
RLAFDESLWHSADLVGKAQLNGELGQVLTAGVSRLRCPHSCIGDPCFKNTQPLRIQHLDL
SSCTVETSVLEDILSRCRRLQNLSVEGLVLSDPILQSLSKNTELVRLNLCGCTGFSADSL
TEMLQSCNKVEELNVSWCNFSSEHVQAVVNSVPSTITQLNISGYRQNLTMEDVKALVERC
PNLTHLDLSDSVLVTVDSFPFLQQLSSLSHLALSRCYQIHPAALIEFEKYETLQNLEVFG
LIQDNSLPILSKGLPRIQINTQPFSTVARPTAAARKDRTLWGMHCRLVYKP
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgagaggcctctccaggagctgccgtgcctaagtgagaatctcgatggatcc
ctgctgtgcatgtcgcagtcaaaagcaaagaaaagaccatgtgtgtatggagagggactg
caatctgaaaacactcctcacgagctcatccagcactggtctcctcctcgcaaacagccg
cgaccctgcgccaagggcaaagagaacggctttgtgctcgccagacgccccaggaggagc
agagacgcagcaggtgtgttgtgttgggacacgctcccagacgagctgctgttggggatt
ttctctcgtctctcactacaagaccttcttagaacatctcgcgtctgcaaacgctggcat
cgactggcgtttgatgagtcactctggcacagcgctgacttggtaggaaaagcacagctg
aatggtgagctggggcaggtgctcacagcaggagtatcgaggctgcgctgtccacactcc
tgcatcggcgacccctgctttaagaacacacaacccctgcgtatccagcatttggacctg
tccagctgcaccgtggagacgtctgtactggaggacattctgtcacgttgcagacggctg
cagaatctcagcgtggagggtcttgtgctctccgatcccatcctccaatctttgagcaag
aacacagagctggtgaggctcaacctgtgtggctgcactggtttctcagctgactctctg
actgagatgcttcaatcctgcaacaaggttgaggagctgaacgtgtcatggtgtaacttc
agcagcgaacacgttcaggctgtcgttaacagcgtcccctccacaatcacgcagctcaac
atcagcggctacagacaaaacctcaccatggaggatgtaaaggctctggtggaaagatgt
ccaaacctcacgcatttggacttaagtgacagcgttcttgtgaccgtagacagcttcccc
ttcttgcagcaactctcctcactgagccatttagcgctgagccgctgctaccagattcac
ccagcagccctcatagaatttgagaagtatgagactctgcagaacctggaggtatttggt
ctgatacaggacaactcgctgcccatcctgagtaaagggttgccacggatacagatcaac
actcagccgttctcgacagtggctcgtcccactgcggccgcacggaaagaccgcacgctg
tggggaatgcactgtcgacttgtgtataaaccttaa
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