Silurus meridionalis (southern catfish): 124397666
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Entry
124397666 CDS
T08004
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124397666 (rtn1a)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124397666 (rtn1a)
Membrane trafficking [BR:
smeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
124397666 (rtn1a)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124397666 (rtn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
DUF4736
Babuvirus_MP
BTBD16_C
Motif
Other DBs
NCBI-GeneID:
124397666
NCBI-ProteinID:
XP_046723262
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All DBs
Position
2:complement(26951040..26976556)
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AA seq
745 aa
AA seq
DB search
MSGTGEPYGEERERSGPGFRKEEEEEDVHGKKQEAEIEEEEVEEEEKKMKMLKPTCPGDE
ARKGTGVAMETASSVLVSGLFLKSSSEQSDLYTSLLSTNSSSSNPFISSIPLSSSEHDRA
PLATLGSDSGIGMTPGDPCDIHNQKSEPYNYMDMSNDLCGLSNRSKTVSKMQPIGSRVDH
DDDDVDDVKDGFMDLKAKMEKEAFGLGGYLEKNAENLPVNEDLKNTFPYVEDQSDEEFLE
KKTCPASPVKITVTKDSCIRATEQLRVGVYERESVLSLGKEGVPTVTLSEPEDDSAASSV
NHSPNHSPTGRESPSEILFQPVGMKCTNNSTLYHDTKSPTKHSSRFGMQDSGESGDSEIE
PDSPRHGNQLGTKDRPGKLFEPSVIEKICDNEGRPNNPIQVSMNMKGEFLQHGNPPLYSL
LREEREAELDTDLLIESASEESPKREKVVKCTLKPSSPPSSPPLGSSPVSPPLKEKQQEI
KEEKKERPSTTPREGSNTQTLQWQDEMFTKVKPEEMVSFKQQPLEDGGNKNVISTEDESD
DKEVELLMFLHNFNKQKVVELLHWRDVKQTAVLFSSVLLLLFSLTQFSVVSVMAYLALAA
LSTTICFRVYKSVLQAVQKTDNGHPFKAYLEKEISLSPEQISKYVEKVQLYINCTLKELR
RLFLVQDLVDSLKFAVLMWFLTYVGALFNGLTLLILAVVCVFTVPLVYEKYQKQIDQYLG
LVRTQVNAVMTRLREKVPGAKRKHE
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggacgggagaaccgtacggagaggagcgcgagcggtccgggccgggattcaga
aaagaggaggaggaggaggatgtgcacggtaaaaagcaggaggcggaaatagaggaggag
gaggtggaggaggaggaaaagaagatgaagatgcttaaaccgacctgtcccggtgatgaa
gcgcgcaaaggaaccggcgttgccatggaaactgcatcctcagtcttggtgtctggtcta
ttcctgaaatcttcctccgaacagagtgacctctacacctctctcctctccactaactcc
tcctcctcaaacccgtttatctccagcattcctctcagctcttcagagcacgatcgcgct
ccgcttgcgactctggggagcgactctggaattggaatgacccctggtgacccctgcgac
atccacaaccaaaaaagtgagccctacaactacatggatatgagcaatgacctttgtggc
ctcagtaaccgcagtaagacggtgtcaaaaatgcagccaataggtagccgcgtggatcat
gatgatgatgatgttgatgatgttaaagatggatttatggatcttaaggcaaagatggag
aaggaagcatttggattgggaggctacctggagaagaatgctgaaaacctgccagtaaac
gaagacttaaaaaacacctttccttatgtggaggaccaatcagatgaagagttcctggag
aaaaaaacatgccctgccagtccagtgaagattacagtgacaaaagattcctgtatccga
gcaaccgaacaattaagagttggagtgtatgagagggaaagcgtgctgagtttgggaaaa
gaaggtgttcccactgtaacactgtctgaaccagaagatgacagtgcagcttcctctgtc
aatcattctcctaaccactcccctacaggaagagagtcaccctccgaaatcttgttccaa
cctgtagggatgaagtgcacgaacaacagcaccctctaccatgacaccaagagtcctaca
aagcactcatcacgatttgggatgcaggacagtggggaatctggagactcagaaattgag
cctgactccccaagacatggtaatcagctcggcaccaaagaccgacctggtaaactgttt
gagccatcagttatagagaagatttgcgacaatgagggaagacctaacaatcctatccag
gtttccatgaacatgaagggggaatttctgcaacatggcaaccctccactttacagcctg
ctgcgtgaggagagagaggcagagctggacactgacctgctcatcgaatctgcttctgag
gagagtcctaagagggagaaggtagtgaagtgcaccctaaaacccagctcccctccgagc
tcacctccacttggaagcagtcctgtgtcaccacctctgaaagagaaacaacaggaaata
aaagaggaaaaaaaggaaaggcctagcacaacaccaagagagggatccaacactcagaca
cttcaatggcaagatgaaatgttcactaaggttaagcctgaagagatggtgtcttttaaa
cagcaacctctggaggatgggggaaataaaaatgtgattagtactgaagatgaaagcgac
gataaagaagtggagctgctgatgttcctgcacaacttcaacaaacagaaagtggtggag
ctgctgcactggcgggacgtgaaacagacggccgtgttgttcagcagtgtgttgttgctg
ctcttctctctgactcagttcagcgtggtgagtgtgatggcgtacctcgccctcgccgcg
ctctccaccaccatctgcttcagggtctacaaatccgtgctgcaggccgtgcagaagacc
gataatggacaccccttcaaggcgtatctggagaaggagatctctctctcacctgagcag
atcagtaaatatgtggagaaagtacagctctacataaattgcaccctgaaggagctgcgc
agactttttctggtccaggaccttgtggactccttaaagttcgcagtgttgatgtggttc
ctgacatacgtcggcgctctatttaatggcctcactctgctcattctggctgtggtgtgc
gtgttcaccgtgccactggtgtacgagaaatatcagaaacagatagatcagtacctggga
cttgtgaggactcaagtgaacgctgtaatgacacggttgagggagaaggttcctggagcc
aagaggaagcatgaataa
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