KEGG   Silurus meridionalis (southern catfish): 124397675
Entry
124397675         CDS       T08004                                 
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    124397675 (rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smeo03019]
    124397675 (rae1)
   03036 Chromosome and associated proteins [BR:smeo03036]
    124397675 (rae1)
Messenger RNA biogenesis [BR:smeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     124397675 (rae1)
Chromosome and associated proteins [BR:smeo03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    124397675 (rae1)
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WDR55 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_RFWD3 ANAPC4_WD40 Beta-prop_IFT140_1st eIF2A Beta-prop_EIPR1 NBCH_WD40 Beta-prop_SPT8 Exonuc_X-T_C
Other DBs
NCBI-GeneID: 124397675
NCBI-ProteinID: XP_046723311
LinkDB
Position
1:19310435..19317481
AA seq 369 aa
MSLFGSSAGFGPGGTSVFGNTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTLPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHEGPIRTIHWIKAPNYSCIMTGSWDKTLKFWDTRNPNPMMSLQMPERCYCADVVY
PMAAVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTATPQDIYAVNAIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNHNGNIFAYSSSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagcttgttcggttcaagtgctggatttggacctggaggtacaagtgtgtttggcaac
accacaacagacagccataatccaatgaaggatgttgaagtcacgtccccacccgatgac
agcataagctgtttggcctttagccctccaacgttgcctggaaactttttgattggtggc
tcttgggccaatgatgtgagatgctgggaggtgcaggataatggtcagacggtccctaaa
gctcagcagatgcacacaggccctgtgctggatgtctgctggagtgatgatggaagtaaa
gtctttacagcctcctgtgacaaaactgccaagatgtgggatctgaacagcaaccaggca
atgcagatagcacaacatgaaggtccaatcaggacaatccactggataaaagcgccaaac
tacagctgtatcatgactggtagttgggacaaaacactgaaattttgggacactcgcaat
ccaaaccccatgatgtccttgcagatgccagagaggtgttactgtgccgacgtggtgtat
cccatggctgcagtggccactgcagaacgagggctaatagtgtaccagctggagaatcag
ccatctgaattccggcgtatagattcacccctcaaacatcagcatcgctgtgtggccatt
tttaaggacaaacaaaataaacccactggatttgcactgggcagtattgagggacgagtg
gccattcactatattaacccacccaatcctgccaaggacaattttacctttaagtgccat
agatctaatggaacaaacaccgccacaccacaggatatttatgctgtcaatgccattgct
ttccatccagtgcatggcacattggccacagtgggctctgatggccgcttcagtttctgg
gacaaggatgctcgcacaaagctaaaaacctctgagcagcttgatcagccaatcacagct
tgctgcttcaaccacaatggcaacatctttgcctacagttccagctatgattggtctaag
ggacacgagtactacaacccccagaagaaaaactacatttttctgcggaatgccgctgag
gaactcaagcctcggaacaagaaatggtga

DBGET integrated database retrieval system