Silurus meridionalis (southern catfish): 124397675
Help
Entry
124397675 CDS
T08004
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124397675 (rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124397675 (rae1)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124397675 (rae1)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124397675 (rae1)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124397675 (rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WDR55
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_IFT140_1st
eIF2A
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_SPT8
Exonuc_X-T_C
Motif
Other DBs
NCBI-GeneID:
124397675
NCBI-ProteinID:
XP_046723311
LinkDB
All DBs
Position
1:19310435..19317481
Genome browser
AA seq
369 aa
AA seq
DB search
MSLFGSSAGFGPGGTSVFGNTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTLPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHEGPIRTIHWIKAPNYSCIMTGSWDKTLKFWDTRNPNPMMSLQMPERCYCADVVY
PMAAVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTATPQDIYAVNAIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNHNGNIFAYSSSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgttcggttcaagtgctggatttggacctggaggtacaagtgtgtttggcaac
accacaacagacagccataatccaatgaaggatgttgaagtcacgtccccacccgatgac
agcataagctgtttggcctttagccctccaacgttgcctggaaactttttgattggtggc
tcttgggccaatgatgtgagatgctgggaggtgcaggataatggtcagacggtccctaaa
gctcagcagatgcacacaggccctgtgctggatgtctgctggagtgatgatggaagtaaa
gtctttacagcctcctgtgacaaaactgccaagatgtgggatctgaacagcaaccaggca
atgcagatagcacaacatgaaggtccaatcaggacaatccactggataaaagcgccaaac
tacagctgtatcatgactggtagttgggacaaaacactgaaattttgggacactcgcaat
ccaaaccccatgatgtccttgcagatgccagagaggtgttactgtgccgacgtggtgtat
cccatggctgcagtggccactgcagaacgagggctaatagtgtaccagctggagaatcag
ccatctgaattccggcgtatagattcacccctcaaacatcagcatcgctgtgtggccatt
tttaaggacaaacaaaataaacccactggatttgcactgggcagtattgagggacgagtg
gccattcactatattaacccacccaatcctgccaaggacaattttacctttaagtgccat
agatctaatggaacaaacaccgccacaccacaggatatttatgctgtcaatgccattgct
ttccatccagtgcatggcacattggccacagtgggctctgatggccgcttcagtttctgg
gacaaggatgctcgcacaaagctaaaaacctctgagcagcttgatcagccaatcacagct
tgctgcttcaaccacaatggcaacatctttgcctacagttccagctatgattggtctaag
ggacacgagtactacaacccccagaagaaaaactacatttttctgcggaatgccgctgag
gaactcaagcctcggaacaagaaatggtga
DBGET
integrated database retrieval system