KEGG   Silurus meridionalis (southern catfish): 124397719
Entry
124397719         CDS       T08004                                 
Symbol
ubap2a
Name
(RefSeq) ubiquitin-associated protein 2a isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smeo04121]
    124397719 (ubap2a)
   03400 DNA repair and recombination proteins [BR:smeo03400]
    124397719 (ubap2a)
Ubiquitin system [BR:smeo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    124397719 (ubap2a)
DNA repair and recombination proteins [BR:smeo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     124397719 (ubap2a)
SSDB
Motif
Pfam: UBAP2-Lig UBA_4 UBA_RAD5A GIP1_N UBA_8 Sublancin Methyltransf_32
Other DBs
NCBI-GeneID: 124397719
NCBI-ProteinID: XP_046723367
LinkDB
Position
15:3678947..3694273
AA seq 1198 aa
MMTSLGGDRARGTREKVLPTSTQTTQPQKQLQATAEQIRLAQMIYDKNDADFEDKVNQLM
EVTGKNQDECMVALHDCNEDVNRAINFLLEGTSDTTSWETVGKKKSLGKDAISSESKENK
ENREKKGEKESNRARGGANRRGKGGASRNRPARVEENGVEPASVEKGSDRGRRGKGRVSG
GRGRGRASGASRFTAQGMGTFNPADYTMDSGTTNSHADVWESGTNDATDGTVAWRNTLED
WAAEDWTEDVSLSETKVFTSSCAPPAENHITPGQSLDLASLLQKPAGREELENLKSPSSQ
GLGHSLVFTNSHHQPTRNGGTTTGTTSYAHATLSSVLGSGFGELGGPKLGQTAGQQILEQ
LKGPGLGQLTSQPPSLGDNCAPGGGLGGTGMSVPSSSWDIKPPGTQNSASLPSQFSREFK
MQPEPSLVLSQLSQRQQSSLSNTGSLPLARQPSPPAQNGPSANQATMEAFSKAPEPSQTH
VANPQVADLQVSSTQHRQIKTQKRRIAPTSKIPSTAVEMPGSADVSGLNVQFGALDFGSE
TALPDFSQTENCNSEATREAPLPVPQTQSSLYSKPISESLASPVSLLLPLASSDSIYPPP
SVPLPSLAPSLTTPSAASVPTSTSSSSSSSSSSSSVASSAGNSFDCGVAPHSRLNFSQNK
ESSGPVTNGFNGVRTSVALDSTSSSSTPKPESPSLGSSTGVAPSAPLSLLPSTVTPHSST
LSSLAPELPSATLPSLSRDVSSGHSSVSALGTSSSLTYTNVDSVNSLAASSAAFSTSISA
LSSNSVSSAGSSSLHSAALGLSGNGTNAPAIRAAPLLSSSTGKAPPNLSQGVPPLLPNQY
IMGPGGLLPAYPQIYGYEDLHMLQSRLPMDYYGITFPGPTATLSSRDGSLANNPYSGEVT
KFGRGDSTSPAPPTTLSAAHVPQAAQPPQAQSQGQNQPQPQAHHSAQQAFLNPALPPGYS
YTGLPYYPGVPGMPSAFQYGPTMFVPPASAKQHGMGLSNPSTPFQQPSGYSQHTFSSGYD
DLTQGPAGAEYSKGYSNSSQTQAKSAASGPGKGAKTFIFFKTFKFDLAREHINISYRIST
GVSVTSSNSGVPDISGTVYNKTQSFDKQGFHAGTPPPFNLPSALGGTGPLNPGGAPGYAP
APFLHILPAHQQPHSQLLHHHLTQDGQGGPNQRNQSSSMQQKTQVNKSSYGSSPYWGN
NT seq 3597 nt   +upstreamnt  +downstreamnt
atgatgacctcgctgggcggcgaccgggcccggggcactcgggagaaggtgctgcccaca
tccacacagaccacacagccacagaaacagcttcaggctacagccgaacaaatccgactt
gcccagatgatttacgataagaatgatgccgattttgaagataaagtcaaccagctcatg
gaggtgactggtaagaaccaggatgagtgcatggttgctcttcatgactgtaatgaggat
gtcaacagagccatcaacttcctgttggaggggacctctgacacaacctcttgggagacg
gtgggcaagaagaaaagcctgggaaaggacgccatttcctcagagagcaaggagaacaag
gagaatcgggagaaaaaaggcgagaaagagagcaacagggctcgtggaggagcaaaccgg
agaggaaagggcggggccagtcgtaatcggccggcgagggttgaggagaacggagtagaa
cctgcatctgtggagaaaggatctgaccgtggccgcagagggaaaggacgagtgtctgga
ggcagagggagagggcgagcctcaggtgccagcaggttcacagcacagggaatggggacc
tttaacccagcggactacactatggacagtggcacgaccaactcgcacgctgacgtctgg
gaatcggggaccaatgatgccacagatggtacagtggcgtggcgcaacactctggaagac
tgggcagctgaagactggactgaggatgtgagcctctcagagaccaaagtgttcacctct
tcatgtgcacctccagctgaaaaccatatcacccctggccaaagtctggacctggcatct
ctgctgcagaagcctgctggcagggaggagttggagaacctgaagtcgccctcgtctcaa
gggcttggacacagcctggtcttcaccaactcccaccaccagcccacacgcaacggaggc
accaccactggcactaccagctacgcacatgccacactgtcctcagttctgggttctgga
tttggggaactgggtggccctaagctgggacagaccgctggacaacaaatactggagcaa
ctgaagggaccaggtcttgggcagcttacctctcagcctcctagcttgggggacaactgt
gcccctggaggaggcctggggggtacagggatgtctgttccctcttcatcctgggatatc
aaaccccctggaacacagaactctgcttcactgccctcccaattcagtcgggagtttaag
atgcaaccagagccttcattggtgctaagtcagctgagccagcggcagcagagctctctg
agcaacacggggtctctaccgctggcaaggcagcccagtcctccagcacagaatggcccg
tcagccaaccaggctacaatggaggccttttctaaagcaccagagccttctcagactcac
gtggccaatccgcaggttgcagatttgcaggtcagcagcacgcagcatcggcagattaag
acacagaaacgaaggatagctcccacttccaagattccatccactgcggtggaaatgccc
ggctcagcagacgtgtctgggctcaatgtgcaatttggcgctttggacttcggctcggag
acggctttgccagacttcagccaaacggagaactgcaacagtgaagctacacgagaagcc
cccttacctgttcctcagactcaaagcagcctctattccaaacctatcagtgaatctctg
gccagtcctgtctcattgctgctgcccctggcctcttctgacagtatctacccacctccc
tctgtgcctctgcccagtcttgctccctctcttactactcccagtgctgcctctgtgccc
acctctacctcctcatcctcctcgtcctcctcttcatcttcatcggtggcgtcgtcagct
gggaacagctttgactgcggagtggctcctcattcacgactgaatttctcccagaacaag
gagtcctctggacctgtgacaaatggttttaatggtgttaggacctctgttgctctagac
tctacatcaagttcttccactccaaagccagagtctccgtctttaggcagtagcaccggt
gttgcaccttctgccccattgtctctgttgccctcaacagttacgccccacagctcaact
ctatccagcctggcacctgagctgccctctgcaaccctcccatctctcagcagggatgtg
agcagtggtcattcctcagtatcagctcttggcaccagctcttctttaacgtacactaat
gtggatagtgtgaattccttggctgcgtcatccgccgcattctccacatcaatctcggct
ctttccagtaacagcgtgagcagtgcaggcagcagcagcctgcactcagccgctcttggg
ctcagtgggaatggaaccaacgcaccagccattagggccgcacctctgctttcttcttct
actggaaaagcccccccaaacctgtctcagggggttcctccgctgctacccaatcagtat
atcatggggcctggaggcctgctacccgcatacccgcaaatctatggctatgaagacctc
catatgctacagtccaggctaccaatggattactatggaatcacattcccaggacccact
gcaaccttgtccagtagagatgggagcctagccaataatccttactcaggtgaagtgacg
aagttcggcaggggcgactccacctcaccggcaccccctactaccctgtcagcagctcac
gttccccaggcagctcagcccccacaggcgcagagccaaggccagaaccagcctcagccg
caggcccaccacagcgcccagcaggcctttcttaacccagctctgccccctggttacagc
tacacaggcttaccctactatccaggggtgcccggcatgcccagcgccttccagtatggt
cccaccatgttcgtacctcctgcttctgctaagcagcacggcatgggcctgagcaacccc
tccacaccattccagcagcccagtggttacagccagcacacctttagctcagggtatgat
gacctgacacaaggcccagcaggagcagagtacagtaaaggctacagcaacagctctcag
acacaagccaaatctgctgcttctggcccaggaaaaggtgccaaaacattcatatttttc
aaaacctttaaatttgatctcgcacgagaacatatcaatatttcctatcgcatctccaca
ggtgtctcagtgacgtccagtaattctggtgttcctgatatcagcggaactgtttacaac
aagactcagtcctttgataaacagggttttcatgctggcacaccacctccgttcaacctg
ccctcggctctagggggcaccggacccctgaaccctggcggagcccctggttatgcgcca
gctccattcctgcatatcctgcctgctcaccagcagcctcactctcagctgctgcaccac
caccttacccaggatggacagggtgggccgaatcagaggaaccagagcagcagcatgcag
cagaagacccaggtcaacaaatccagctacggcagctctccctattggggcaattaa

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