Silurus meridionalis (southern catfish): 124397722
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Entry
124397722 CDS
T08004
Symbol
pus1
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smeo03016
]
124397722 (pus1)
Enzymes [BR:
smeo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
124397722 (pus1)
Transfer RNA biogenesis [BR:
smeo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
124397722 (pus1)
Prokaryotic type
124397722 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
124397722
NCBI-ProteinID:
XP_046723372
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All DBs
Position
15:4758127..4762963
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AA seq
416 aa
AA seq
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MLKFCPFVRVFSSQRFKSAVKPRGQCRIGRFCGLFVQKMSGEENQNPSNMPKLKRAPESS
EVENETKKLRIEEEKRFPKRKVVLLMAYSGKGYYGMQRNPGNSQFKTIEDELVSALISAG
CIPENHGDDMXKMSFQRCARTDKGVSAAGQVVSLKLWLIEGILEKINTHLPPQIRVLGLK
RVTGGFNSKNNCDARTYAYMLPTVSFSPKDTDQEDTSFRLDTETLQKVNKLFALYKGTHN
FHNFTSQKGPRDPSAKRYITQMSCGEPFVREGAEFAVITVRGQSFMMHQIRKMIGLVIAV
VKGYAQEEIIERSWAEEKVDVPKAPGLGLVLERVHFDRYNKRFGGDGLHETLEWVQEEDA
ISAFKEAHIYPSIVETECQEKSMVSWMNTLPIHDFTATATGKQERKDEDEDGNTSD
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaattctgtccttttgtccgagttttcagtagtcagcgtttcaagtcagcagtt
aaacccagaggtcagtgcaggatcggaaggttttgtggactgtttgtgcagaagatgtct
ggggaggaaaaccagaatcccagcaacatgcccaagctgaaaagagctccagaaagcagc
gaggtggaaaatgaaacgaagaagctgagaatcgaagaggagaagagattccccaaaaga
aaagttgtcctccttatggcttattcaggaaaaggatactatggaatgcagaggaatcct
ggaaattctcagtttaaaactattgaagatgaactggtcagtgcgctcatcagcgccggg
tgtattcctgaaaatcacggagatgatatgnaaaagatgtcttttcagagatgtgccagg
actgacaagggtgtgtctgcagctggccaggtcgtatctctgaagctgtggctgatcgag
ggcattctggaaaagatcaacacccaccttccaccacagattagagttttaggtttgaag
agagtcacaggcggtttcaactccaaaaacaactgcgacgccaggacctacgcgtacatg
cttcccacagtctcattctctcctaaagacaccgaccaagaggacacgtccttccgcctg
gacacagagacacttcagaaagtcaacaagctctttgcgctctacaaaggaacccataat
tttcataacttcacgtctcagaagggccctcgggacccgagtgctaagcgctacatcacg
cagatgtcctgtggcgagcccttcgtcagggagggggcggagtttgcggtgatcacagtg
cgaggccagagcttcatgatgcaccagatcaggaagatgattggattggtgattgctgtg
gtgaaaggatacgcgcaagaggagatcatcgaaaggagctgggccgaggagaaggtcgat
gtccccaaggctcctgggcttggcctggtgttggagcgggtgcactttgaccggtacaac
aagcgtttcgggggagacgggcttcacgagacactggagtgggtgcaagaagaggacgct
atatccgcctttaaggaagcacacatttaccccagtatagtggagacggagtgtcaggag
aagtccatggtcagctggatgaatacactgcctattcatgactttaccgccacggcaacc
ggcaaacaagaacgcaaggatgaagatgaagatggaaacacttcagactga
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