Silurus meridionalis (southern catfish): 124397723
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Entry
124397723 CDS
T08004
Symbol
nrxn2a
Name
(RefSeq) neurexin 2a isoform X1
KO
K07377
neurexin
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124397723 (nrxn2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124397723 (nrxn2a)
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
124397723 (nrxn2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
124397723
NCBI-ProteinID:
XP_046723374
LinkDB
All DBs
Position
15:18494568..18894111
Genome browser
AA seq
1660 aa
AA seq
DB search
MKMARKWRCSGRRLRISVLLLLLAALSLALEFDGLPGQWARYGRWEAGATGELSFAMKTN
VSDSVLLYLDDGGNCDFLELLISDGRPLLRFALHCGEPATLHMETRVSDQRWHRVQLVRN
FRHTTLTVDSEVKVAEVKSKRKEMVVASDLFVGGIPPDVRLSALTSSTVKYEPPFRGLIA
NLKLGEATPVLLDSQGVKIDLEYLCNKQNPCSNGGHCSIYQSDVLCDCTNTGYKGKYCTE
AVQQVFEGLAHLMLKSQAPGPAPLKATPAAGDTELGRGESVATFKGSEFFSYNLSQTPIQ
SSSDDITMSFRTVQRNGLLLHTGKGADYVNLSLKSGAVCLIINLGSGAFEALVEPTDGKF
NDNVWHAVRIARNLRQVTISVDGLLTTTGYTQEDYTMLGSDDFFYVGGSPNTADLPGSPV
SNNFMGCLKDVVYTNNEFRLELSRLAELRDPKVALHGDLTFRCEDVAALDPISFDTSAAF
ISLPHWSGKKTGSISFDFRTTEPNGLLLFSHGHMQGSREHRPRVDFFAMELLDGFLYLLM
DMGSGSVKLKSSNKKVNNGEWCHVDFQREGRKGSISVNGRSMPFSTNEGSEILDLDGEMY
LGGLPEESKALPLPPEVWTASLRLGFVGCMRDMFVDGRSRDLRRLAELQSAAGVSVSCTR
ETHRRCGTEPCVHGGHCHEGWNRHICDCTGTGYLGPNCETESTVLSYDGSMFLKVLMPRA
MHTEAEDVSLRFMSQRAYGLLMATTSSESADTLRLELDGGKVKLTVNLDCIGIDCNLSKG
PETLNAGHKLNDNEWHSVKVVRRGKSLQLSVDNVTVEGQMSGAHTQLEFHHIETGIMTER
RFISIMPSNFIGHLQGLSFNGVPYLDQCKNGDISYCELNARFGMRRIVAKPVSFRTRGSY
LALSTLQAYTSMHLFFQFKTTSPDGLLLFNSGDGSDFIVVELVKGYIHYVFDLGNGPSLM
KGNSDKPLNDNQWHNVVVSRDDSNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGVGKSM
YNSLPKLIASRDGYQGCLASVDLNGRLPDLISDALHKVGQVEKGCDAGPGTTCSEDSCSH
QGVCLQQWEGFTCDCTMTTYGGPRCSDPGTTYIFGKGGALITYTWAPNERPSTRADRLAV
GFSTQLKDAILVQVESTQGLGDFLQLHIEQGKVCVIFNVGTDDITIDEPAVVVSDGKYHV
VRFTRSGGNATLQVDNQAVIERYPTGNFDNERLAIARQRIPYRLGRVVDEWLLDKGRQLT
IFNSQAAIKIGGQDKGRPFQGQISGLYYNGLQVLKLAAEGDPSVKVEGNLRLVGDAPSVL
STETTSATPPAAMDMSTTIMETTTTMATTTTRRQRSPSLKDSITQNSDDLLVASAECPSD
DEDLEECEPGTGGELVLPIITMDTQDPQSVAPHYPAIPPPPTSLSPLQTTKESLVLSEPR
PPCPPDQEDCGEPMEVSAFGSGEMTESDDEDFYKNSPMVTDRTVLPPPPSVGKSGGQKPG
AHRPHAPPAPPAPTTHPDQLHIPAGKMNTRDQVLLPPAPSSRLTPGLTYPPDFPRVPTAR
PSASVERGLPGAVEVIRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYQVEQR
RGSGSESNGAVVKEKTPGTTASMSKTVAKGKKNKDKEYYV
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggcaagaaagtggaggtgtagtgggcggagactgcggatctcggtgctgctg
ttgctgctggcggctttatcgctggcactggagtttgatggcctgccaggccagtgggca
cgctatggccgttgggaggctggcgctacgggtgaactgagcttcgcaatgaagaccaac
gtgagcgactccgtgcttctgtatctggacgacggtggcaactgcgactttctggagctg
ctgatcagcgacggtcgccctctgctacgtttcgcgctgcactgtggcgagcctgctacg
ctccacatggagacacgagtcagcgaccagcgctggcacagggtgcagctggtgcgcaac
ttccgccacaccacgctgacggtagacagtgaggtcaaggtggctgaggtcaaatccaag
cgtaaggagatggtcgtggcaagtgaccttttcgtgggagggattcctccggatgtgcgc
ctttccgctctcacctccagcaccgtcaagtacgagcctccattccggggcctgatcgcc
aatctaaagctaggagaagcgactccggtccttctggacagccaaggtgtgaagattgat
ctggagtacctttgcaacaaacagaacccttgtagcaatggaggacactgctccatctac
cagagcgatgtcctgtgtgactgcactaacaccggctacaagggaaaatactgcactgaa
gctgtccaacaagtgttcgaaggtctggcgcacctgatgctaaagagccaagccccagga
cctgctccactgaaggccactccagctgcaggtgataccgaactagggcgaggcgagtca
gtggcaacgtttaaaggcagcgagttcttcagctacaacctgtcccagacgcccatccag
agcagctcggacgatatcacgatgtcgttccgtacggtccagcgcaacggcctgctgctg
cacacaggaaagggggccgattatgtcaatctgtcgctgaaaagcggcgccgtgtgcctc
atcatcaacctgggctcaggcgcctttgaggccctggtggagccgaccgacggcaagttc
aacgacaacgtctggcatgccgtgcgcatcgcccgcaacctgcgccaggtcaccatatct
gtggacggcttgctgacgactacaggctacactcaggaggactacaccatgctgggttca
gatgacttcttctatgtgggaggcagtccaaacacggctgaccttcctggctctccggtc
agcaacaacttcatgggctgcctgaaagacgtggtctacactaataatgagtttagactg
gagctttctcggctggccgagctgcgggaccctaaagtggccctacacggtgacctgacc
ttccgctgtgaggatgtggctgcccttgatccgatcagcttcgatacatcggctgccttc
atcagcctgcctcactggagcggaaagaaaaccggatcaatctcttttgactttcgcacc
acagagcccaacggcctgctgctgttcagtcacgggcacatgcaaggttcacgcgagcac
agacccagggttgattttttcgccatggaactgctggacggcttcctgtacctcctaatg
gacatgggctcaggcagtgttaaattaaagtccagtaacaagaaggtgaacaatggcgag
tggtgtcatgtggacttccagcgagaaggacgcaaaggttccatctcagtgaacggccgg
agcatgcccttctcgactaacgagggcagcgagatcctggacttggatggtgagatgtac
cttggcggtctacccgaggaaagcaaggcccttcctctgccccccgaggtgtggacagcg
tctctgcggttaggctttgtgggctgcatgcgggacatgtttgtggacgggcggagccgg
gacctgcggcgtctggctgagctgcagagtgcagcaggtgtcagtgtgtcctgcacgcgt
gagactcacaggcgctgcggcaccgagccctgtgtccacggcggccactgccacgaaggc
tggaatcgccacatatgcgactgcacaggcaccggatatctgggtccaaactgcgaaact
gagtccacagtgctgagctacgatggcagcatgtttctgaaggtgctcatgcctcgtgcc
atgcacacggaagctgaggacgtctcactgcgcttcatgtcccagagggcttacggactg
ctcatggccaccacctcctcagagtccgccgacaccctgcgcctggagctggacggggga
aaagtcaaacttaccgtcaacttagattgtatcgggatagactgtaaccttagtaaagga
ccggagactctcaatgcagggcacaagctgaatgacaacgagtggcactctgtgaaggtg
gtgcgccggggcaagagcctgcagctctctgtagacaatgtgactgtggaaggccagatg
agcggagcacacacacagctggagttccaccacatcgagaccggcatcatgacagagcga
cgcttcatctctattatgccctcgaacttcatcgggcacttgcaaggcctttcgtttaac
ggagtgccctacctggaccagtgcaagaatggcgacatatcgtactgcgagctgaacgcc
cgcttcggcatgcgtcgcatcgtggctaaaccggtgagcttcaggaccagaggcagctac
ctggctctgtccaccctgcaggcctacacctccatgcacctgttcttccagttcaagacc
accagtcctgacggtctgctgctgttcaactctggagacggcagcgacttcatcgtggtg
gagctggtcaaagggtacatccattacgtcttcgacctcggaaacgggccgtcactcatg
aagggcaactccgacaagccgctcaacgacaaccagtggcacaatgtggtggtgtctcga
gatgacagcaacgtacacacactgaagatcgactcccgcactgtcacccagcactccaac
ggagcccgcaatctggacctcaaaggggagctgtacatcggcggtgtggggaagagcatg
tacaacagtctgccgaagctgattgcatctcgagacggttatcaaggctgcctggcctct
gtggacctcaacggcaggctgccagacctcatcagtgatgccctacataaggtgggccaa
gtggagaaaggatgtgatgctggcccaggcactacctgctcagaggactcgtgctcacat
cagggggtgtgtctccagcagtgggagggcttcacctgcgactgcaccatgaccacgtac
ggcggccctcgctgcagcgatcctgggaccacatatatattcgggaaaggaggagctctc
atcacatacacgtgggcaccgaatgagcggccaagcaccagggcggaccgactggccgtg
ggctttagcactcagttgaaggatgccatcctggtgcaggtggagagcacgcagggcctg
ggagacttccttcagctacacatagaacaaggaaaagtctgtgtcatcttcaacgtgggt
actgatgacatcactatcgatgagccagccgtcgtcgtgagcgacggcaagtaccatgta
gtgcgctttacccgcagcgggggtaacgccaccctccaggtggacaaccaagccgtcatt
gagcgctatccaacaggcaactttgataatgaacggctggctatagccaggcaaagaatc
ccatacagactcggtcgggtagttgacgagtggctactcgacaaagggcggcagttgact
atcttcaacagccaagcagccattaagatcggaggccaagataaaggccggccattccag
ggtcagatctcaggcctgtactacaacggactgcaggtactaaagctggcagccgagggt
gaccccagcgttaaagtggagggcaacctgcgcttggtgggagatgcgccttcagtactg
tccacagagaccacctcggctacgcctccagccgccatggacatgtccaccaccatcatg
gagaccacaaccaccatggcaaccaccaccactcgaagacagcgctcccccagcctcaaa
gacagcataactcagaactccgatgacctgttggtggcgtcggcagagtgccccagtgat
gacgaggacctggaggagtgcgagcctggcactggaggtgaattagtgttgcctataatt
accatggacacccaagacccccagtctgtggccccacattaccctgccattccccctccc
cctacatccctgagtcccctccagaccaccaaagaatcccttgttctctctgaaccgcgt
ccgccttgccctccagaccaggaggactgcggcgagcccatggaggtgtcagcctttggc
tcgggagagatgaccgagtccgatgatgaggacttttataaaaactccccaatggtcact
gataggacagtgctgcctcctccccctagtgtgggcaaaagtggaggccaaaagcctggt
gcccatcgccctcatgctccccctgccccccctgccccgacaactcaccctgaccagctc
cacatccctgcgggtaaaatgaacacccgcgatcaggtgctcctccccccagccccgtcc
tcccgcctcactccgggactaacctacccacccgatttccctcgtgtgcccacagctcga
ccctcagcttcagtagagaggggcctccccggtgcggtggaggtgatacgtgagtccagc
agcaccacaggaatggtggtgggtatcgtcgctgccgccgccctctgcatcctgatcctc
ctctacgccatgtacaagtaccgcaaccgcgacgagggatcctaccaggtggagcagagg
cgcggctcaggcagcgagagcaacggtgccgtagtcaaggagaagacgccgggcacaacc
gcctccatgtctaagactgtcgcgaaggggaagaaaaacaaagacaaggagtattatgtc
tga
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