Silurus meridionalis (southern catfish): 124397725
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Entry
124397725 CDS
T08004
Symbol
sema4d
Name
(RefSeq) semaphorin-4D isoform X1
KO
K06521
semaphorin 4
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
smeo04090
]
124397725 (sema4d)
CD molecules [BR:
smeo04090
]
Proteins
124397725 (sema4d)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
I-set
Ig_3
Ig_SEMA-3_4_7A
ig
Ig_2
PSI
Ig_Sema4F
Motif
Other DBs
NCBI-GeneID:
124397725
NCBI-ProteinID:
XP_046723385
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All DBs
Position
15:2116397..2168577
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AA seq
944 aa
AA seq
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MDQEHAHYSGKIYLLFFMNFLFHDAFSCLFFSVRDFSRSGDHHEALLLSCLRRGTLGIFL
MNHPSALDTMTYKGNLTLPKIPESNMALGVLGVFLGLLLEVSAHGPSNVPRTSWRNEEVS
LVDFSEPGVFNYSTLLLNEERGALYVGAREAIFHLDINDISVKNNQVLWKVPANDMRLCT
LKGKSEETDCRNYIRVLQVLDEEHLYVCGTHAFQPLCDYLSLKDFTLMKKQDDGRGKCSF
DPSQSFTTVMVDGELYSGTAYNFLGSEPIISRFSRPQTLLRTQYSTSWLNEPSFVYADVI
REGSNSPDGDDDKIYYFFTEVSVEYEFFGKLLIPRIARVCKGDLGGQRTLQKKWTSFLKA
KLVCSMPEINFVFNVIHDVFIVKNPDWRETVIYGVFTSQWGNMGLSAVCAYNMTSVDEVF
SKGKYMQKATVEQSHTKWVPYNGIAPFPRPGACINNQNRMQNITSSLLLPDKTLQFVKDH
PLMADPVLPIGHGPRLTAKAVNYTQIVVERVTALDNKVYDVLFTTTDKGFLHKSVVYEGG
SHIIEEIQLLKNQQPIKTLQLASKEGSFLYAGSDSGVVQAPTAFCDKYVTCIDCILARDP
YCAWGTHTASCINIFQKQDNGPYRKFIQNLRGDAEECPLARPRSMEKPQQMVVKPGSSAE
LPCSVRSNLAQVFWKVNGSFLTESVHSLLMADSTLLIYSVTAQRQGHYECWTVEQAAGKN
FTRMLQSYNLRMEPPEISSDSSVETVDVPDPDASTSGTTNLSSTTSRRACSSSSSSSSSV
WRGLEGGGARLLPPLLSEQSWGVHSHQAFFLFCLAVGPPDVSFEWRSNGRRLETPITEFR
HALGADAVLVSSWVREEPLIKDAQYQCSAMSHVGNDTSKIDLRLSSRDEATGVSEELNQW
RSALAEHEQQFENWKKIWVGVCTQLQHLQIKLLTGWTGLFNPDI
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggaacatgctcactattctgggaagatctacttgctttttttcatgaatttt
ttattccatgatgcattcagctgtctgtttttttctgtccgggatttttctcgctcaggt
gatcaccacgaagcactccttctcagctgtctaagacgtggaaccctagggatcttttta
atgaatcacccatcggctctcgacaccatgacgtacaaaggtaacctcactctacccaag
attccagagtccaacatggctctcggcgtgctgggggttttcctgggactgcttttggaa
gtttctgctcatggaccatccaacgttcccaggacttcttggagaaatgaagaggtgagc
ttggtggacttctccgagccgggtgtgtttaattactccactctgttgctgaatgaggag
cgaggcgcgctgtatgtcggggcgagagaagccatttttcacctcgacatcaatgacata
tctgtcaaaaataaccaggtgctgtggaaggtcccagctaatgacatgagattgtgcacc
ttaaaagggaaatccgaagagacggactgccgaaactacatccgggttcttcaggtgttg
gatgaagaacatctgtatgtgtgtggaactcatgcgtttcagccgctctgtgattacctg
tctttaaaggacttcacgctgatgaaaaagcaggatgatggcagagggaagtgttccttt
gacccttctcagagttttaccacggtcatggtcgatggtgagctgtactcggggacggcg
tataacttcctggggagcgaaccgatcatctccagattctcgcgtcctcagaccctgctg
cggacgcaatactccacctcctggctcaacgagcctagcttcgtgtatgcagacgtgatc
cgagagggaagcaacagcccagacggagacgacgataagatttactacttcttcaccgaa
gtctcggtggaatacgagttctttggcaagctgctgattccacgtatagctcgtgtgtgc
aagggggatttgggaggtcagagaactctgcagaagaaatggacgtcatttctgaaggcc
aagctggtgtgttccatgcccgagatcaatttcgtcttcaacgtgattcatgatgtgttc
atagttaaaaaccctgactggagagaaacagtcatctatggcgtcttcacctcccagtgg
gggaacatgggcctctccgctgtgtgtgcatacaacatgacctcagtggacgaggtgttt
tctaaagggaagtacatgcagaaggccacagtggagcaatcccacactaagtgggtacca
tacaacggcatcgcaccctttcccagacccggagcgtgcattaacaaccagaaccgcatg
cagaacatcaccagctccctgcttctccccgataaaacgctgcagttcgtaaaggaccac
ccgctaatggccgaccccgtgctgcccatcggccatgggccacgtcttaccgccaaggcc
gttaactacacccagattgtcgtcgaaagagtcaccgccctggacaacaaagtctacgat
gtcctcttcaccaccactgataaagggtttctgcacaaatctgtggtgtatgaaggaggc
tcgcacataatcgaggagatccagctgctgaaaaaccaacagccaatcaaaacactgcag
ctcgcttcaaaagagggtagtttcctgtacgcaggttcagactcaggagtagtccaggct
cccaccgcattctgtgacaaatacgtgacctgcatagactgcattcttgcccgcgacccg
tattgtgcctggggaacacacactgcttcttgtatcaacattttccagaagcaggataac
ggaccataccggaagttcattcagaacctgagaggagatgcagaggaatgtccattagcg
aggccacgctcgatggagaagccccagcagatggtggtaaagccgggcagttcggcggag
ctgccttgtagcgtgcgctcaaacctggctcaggtattttggaaggtcaacggcagcttc
ctgactgagtctgttcactccctcctgatggccgactccacgctgcttatctacagcgtg
acagcacagaggcagggtcactacgagtgctggaccgtcgaacaagctgccggaaagaac
ttcacgcgaatgctacaatcctacaatctccgaatggagcctcccgaaatctcgtccgac
tcctcggtcgagaccgtcgacgtccccgatcctgatgcatccacatcaggcaccacgaac
ctcagctccaccacgtcaaggcgagcttgctcatcttcgtcctcctcctcttcctcagta
tggagaggtttggagggtggaggtgctcgtctgctccccccgctcctgagcgagcagtcc
tggggtgttcattcccaccaggccttcttcctcttctgcctggctgtgggtccccctgac
gttagctttgaatggcgctcgaacgggcggagactggagacgcccatcacagagttcagg
catgccctcggtgctgatgctgtgttggtgagcagctgggtgagggaggagcctctgatt
aaagacgcccaataccaatgcagcgccatgtcccacgtgggaaatgacacgtctaaaatc
gatctgcgactcagcagcagagatgaagcgaccggcgtgtctgaagagctgaaccagtgg
agatccgccctcgcagagcacgagcagcagtttgagaactggaagaaaatttgggtaggt
gtgtgcacacagctccagcacctccagataaaactcctgactggctggactggacttttt
aacccagacatatga
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