Silurus meridionalis (southern catfish): 124397747
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Entry
124397747 CDS
T08004
Symbol
arrdc1b
Name
(RefSeq) arrestin domain-containing protein 1b
KO
K26228
arrestin domain-containing protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124397747 (arrdc1b)
Membrane trafficking [BR:
smeo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
124397747 (arrdc1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arrestin_C
Arrestin_N
Vps26
LDB19
Spo0M
Motif
Other DBs
NCBI-GeneID:
124397747
NCBI-ProteinID:
XP_046723442
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Position
15:4817022..4862871
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AA seq
445 aa
AA seq
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MGKLQEFDISFSHNKVVYSPGETISGTLRIITANSLQYKAIKVNCMGSCGISTKVNDTSW
LVEEQYVSSMLSVADKGTLPPGEHSFPFQFLIPTHAPTSFEGPFGKVLYRIRAVIDTPRF
SKDYKAQRPFYLLKVLNLNELPDVEQPSSAVTSKKFTYFLVKTGTLVLRAHSDLRGYTPG
QIIKLSTEIHNKSGKDTGYILASLVQKVTYKTKRPLFDLRTIAEVEGAGVKAGKHAEWKE
QIIVPPLPQSVLAGCSLIDIEYFIQISLKSPETVVTLPIYIGNIAVNLSPTRLNPPTQLQ
HGAAMAPMPGPGPVMPSAPPAEDDEEDVQGAGALSSEEIPTKSHSQQDPSCQSISMSPGA
FSHAPSQAVPQGQQGQSTESTAPLFCVSTGATIPFFSDSNATPVPTTCPLILPPEYSSWE
YPHEPPPTYEESCSSTNSSFNTSMT
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagctgcaggaatttgacatctctttcagccacaacaaagtggtctacagccct
ggagagacgatctcaggaacgctgaggatcatcaccgccaactcgttgcagtacaaggcc
atcaaggtgaactgcatgggctcttgtggcatctcgaccaaggtgaatgacacatcgtgg
ttggtggaggagcaatatgtcagcagcatgctctctgtagctgacaaaggaacccttccc
cccggggagcacagctttccgtttcagtttcttattccaacacatgctcccacttcattt
gagggcccctttgggaaggtcttatacagaatccgggctgtaatagacactcctcgcttc
tctaaggattacaaggctcagagacctttttacctactgaaagtcctgaatctcaatgag
ttgcctgatgtagagcaaccgagcagcgctgtgacatctaaaaagtttacctacttcctg
gtgaagacggggacccttgtgctaagggctcacagtgacctgagagggtacactccaggc
caaatcatcaaactctccacagagatccacaacaaatcaggaaaagacacaggctatatc
ctggccagtcttgtacagaaagtcacctataagacaaaacggccgctgttcgatttacgg
accatagcggaggtagagggagcaggcgtaaaagcagggaaacacgccgagtggaaggag
cagatcatcgttcctcctcttcctcagtctgtccttgccggctgcagcctcatagacatt
gaatatttcatccagatttcattaaagtctcctgagacagtggtcactctgcccatctac
attggaaacatcgccgtcaacttgagccccacaagactgaatccaccgacacaacttcag
cacggagctgcgatggcccccatgcctggccctggaccggtgatgccgagcgcccccccg
gctgaggacgacgaggaagacgtgcagggtgcaggagcactgagcagcgaggaaattcca
accaagagtcattcccagcaggacccttcgtgccagtctatttccatgtcccctggggcg
ttcagtcacgctccgtcccaagctgtccctcagggtcagcagggtcagtcaactgaaagc
actgcaccacttttctgcgtctccacgggggccaccattccctttttctccgacagtaac
gccacgccagtgcccactacctgccctctcattctgcctccagagtacagcagctgggaa
tatccacatgaaccccctcccacttatgaggaaagctgcagcagtaccaactcgagtttc
aacaccagcatgacgtag
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