Silurus meridionalis (southern catfish): 124397781
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Entry
124397781 CDS
T08004
Symbol
sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124397781 (sec16a)
Membrane trafficking [BR:
smeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
124397781 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
124397781
NCBI-ProteinID:
XP_046723501
LinkDB
All DBs
Position
15:complement(7960869..7994501)
Genome browser
AA seq
2174 aa
AA seq
DB search
MQPSPRTAPPGACGTPPPPPPTSGGSNAFRRNRPHKHGALAPNAASTPPPPQPLTDPFAF
GRQGSPSTRVSSQTPPLHSSPLPMQATLAAGFNQTGPPLGPLSGAQVPIAGPVHTFSNPH
PGPSGHPLAPNPGSTEPGYFSSQEPMPYIAQLPNSVPPFSTSTMHAPPAALTVPVQSTPL
FPTLPATSHSGPDHGSRPPSVQNYFQPTSDTPQSFHPHIQAQGLPSVPLPHPGPFQSHTQ
NHSQSAINMGEPAISQQQNSHFSTQGYFSQTGGVPEPWFNQVPQDPMQRSGPVPHNVPFT
DPGTLSMFFHGNDVENVETLSGEGHVNGVSHPPQSREVNEMLNPSLNETVNVKMTAGPCD
SVENLECVPNQEVLPNEPPSTPAYEAGPNLETPDSASRPARSASVSSSYSNVSHSSGHAP
HSSSHPPRRHQGVVGTFIQQESPRPPDAPASHPSAGGYFEQIDSAPAPELSPTFPTPSPP
KPVGVFQASANSSFEPVRSHVVGVRPAEVDRARMVMEKRSDILPGNLEQPPDNMETIYFP
GGQDRRPSSRAQGSRRPSDSPATTLWAQSDAASLGANILLAPAAPPLATTTASSCQQTTE
IIQPPEDVPLDLQPPRALPQPPSENLENPPDSATQASLGYASLLVSTPPTEALNQSVLIA
TPSNYAVISPQLPVQSTNQMSPKETNMPVQPPSQAQVASQLPQGSYSANHPPPLFSQTPI
SFHSPLSQSSTREVQDAQIPLQPAQPTTLKAQSPKNDCESLPPSKSQIPSCASAINQNHR
SNYELLDFSMHQTQSTNQAPFSAPVPAPAPAPVNNAAGFYLQVTKDSQQGARVQSEPPLQ
PPTSNPPRAPSNQSSNGPSGPSNPTHPASQYYPAPHATPVSQATSSSTYLPQSGDSVNTH
DPQRPPSSLGSQHGFGVPPPMPPAPGFSSYYPEYQDGRHPFPPPDPRVQNYYQDDAYRRG
DPPYGRYNGPNPGYREADRQPERPSSRTSQYSDRPNSRQGYAEDYPRSNRSAYEEYYANY
YKFMDQNRWYDPNAMYDPRYRGYYDQTYGWYNYDPEAYGRADPYFSQQYSNRREGYDDPW
RYYPGYDASFDDDCRRRDTYGDELERRSVHSERSTHSRRSSFSSRSQQSQVYRSQPDLVA
ASYEATATTMPADYSYSQFPEQTDTLNYSQYNAENSTWAAPEQAPPRPLTPEKYAAPHCC
ARFGPAGQLIFVQPNLPSAGQPALVEIHSIETMMQDFPEQAELRAFPGPLVKEETHKVDV
IKFAQNKAQECLRNDDLIDKDSAFLIWEFIVLLCRQNGTVVGTDIADLLLKEHRSVWLPG
KSPNEANLIDFNNEALERAEEEGTGPLSLLSDTFMGVAENVGKETERFRELLLFGRKKDA
LEAAMKNGLWGHALLLASKMDNRTHARVMTRFANSLPINDPLQTVYQLMSGRMPASASCC
GDEKWGDWRPHLAMVLSNLTHALDLDTRTISTMGDTLASKGLLDAAHFCYLMAQVGLGVF
TKKSTKIVLIGSNHSLPFAKFCSTEAIQRTEAYEYAQSLGSQPLSLPNYQVYKFIYACRL
AEAGLCAQAFHYCEVISRALLTLPTYHSPVFISQIIQMSERLRFFDPQLKEKPEQELFQE
PEWLLHLRTLSSQIKDGVIMLRTDRSTPQPSACTTPSSEEQASPVETSTFNSDPHNPLMS
TLMPQLGPSAPGVQLMPPAPTAILQDGSVSLQHGSPPNEGVPFNSAVTAPPQPGYIPQYQ
TEDQGPYSSLPAQSPTLPPPNMPPQIPQYTPMEIPPQLPPQTPSQMSPHMSPHFSPHMPP
HMPPHMSPHLPPHNPHQVPGVNPTPTPPSPQQLQPSSPSHGPPSHMDFYDNMAQMSTGRR
SRTTSQSSVHRMPGRRSRTTSESSTHSTGRERSNSLANQSSPPPPIPEAPVQEAPKKNKK
DSPKKGGGGGIFGWIYRRGKNEVHLPDDKNKSIVWDETKQKWVNLDEPEEEKKPLPPPPS
MFPNAPMGGNMGGGPPSGPAAGPSVNMFSRKAGTRARYVDVFNSGRRNSNPAPAVAPPAD
LFAPLAPMAMPANLFVPTAAPDDRQPMEGSVPDSNGNTEHIQPNATGPQMFNPTILPSGP
EGAHSGELSRSSSMSSLSREVSRHLNQVPTEIPAQGPPPTGGVTFYNPSQFAQAMPPARS
RLGRLGQREYPTLK
NT seq
6525 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccctctcctcgaactgcacctcctggagcgtgtggtacaccaccaccaccacca
cctacctctggtggttcaaatgctttcagaagaaatcgaccacacaagcatggcgcattg
gcccccaatgcagcatcaactcctcctcctccacagccactgactgacccttttgccttt
ggtaggcaaggctcaccatctacaagagtaagcagccagactccgcctctacacagtagt
cctcttcctatgcaagctactctcgcagcaggttttaaccagactggtccacctctaggc
ccactatcaggagcacaagtaccaatagctggtccagtacataccttttccaaccctcat
cctggtccttcgggacatccattagcccctaacccaggttccacagaacctggctatttc
agctcccaagaaccgatgccatacattgcccagttgcctaactctgtccctcctttcagt
actagtacaatgcatgctccccctgcagctttgactgtaccagttcaaagtacgcctctg
tttcctacactgcctgctacatcccattctgggcctgatcatggtagtcgtcctccttcc
gttcaaaattactttcagccaaccagtgatacaccacagtcttttcatccacatattcag
gcacagggtcttccatctgtccccttgccccatcctggcccttttcagtcacacactcag
aatcatagtcagtcagccataaatatgggtgagccagccatttcccagcaacaaaactct
cacttttccacccagggttatttcagtcagaccggtggtgtcccagagccatggtttaat
caggttccacaggaccccatgcagcgttccggccctgttccacataatgttccttttact
gaccctggaacactgtctatgttctttcatggaaatgatgtagaaaatgtagagactctt
tctggagagggccatgtcaatggagtctcacaccctccacaaagcagggaagtaaatgaa
atgcttaatccctctttaaatgaaactgtgaatgtcaaaatgactgctggcccatgcgac
tcagttgagaatctggaatgtgttccaaatcaggaagttttacctaatgaaccaccatca
actcctgcatatgaggcagggcctaacttagaaacacctgactctgcatctcgtcctgca
cgatctgcaagtgtctcatccagctatagcaatgtcagtcacagtagtggtcatgccccc
cacagtagcagtcaccctcctcgacgacatcagggagttgttgggacgtttatccaacaa
gaaagcccccggcctcctgatgcaccagcatcccacccttctgctggtggttactttgaa
cagattgattccgctcctgctccagagctaagtcctactttccccacacccagccctcca
aagccagttggggtgttccaggctagtgctaactcttcctttgagcctgtgcgatcccac
gtagtaggagttagacctgctgaagttgatcgtgctagaatggtaatggaaaaaagatct
gatatattacctggcaacttggagcagcccccagacaatatggagactatctactttccc
ggaggacaagatcgcaggccttcgtctcgagctcaggggtcacgaagacccagtgatagt
cctgctacaaccctctgggctcaaagtgatgcagctagtcttggtgcaaatatacttttg
gcacctgcagcacctcctcttgctacaactacagcttcatcatgtcaacaaactactgag
attattcagccaccagaagatgtgcctctggatcttcagcctcctagggcacttccacag
cctccctctgagaaccttgagaacccacctgattcagccactcaggcaagtttgggctat
gcctctttgttagtgtccacacctcccacagaggctttaaaccagtctgttttgattgcc
acaccttcaaattatgctgtgatttctcctcaattgcctgtccaatcaaccaatcaaatg
agtcctaaggaaacaaatatgcctgttcagccaccctctcaagcccaagtggccagccaa
ttgccacagggttcctactcagccaatcacccgcctcctcttttctctcaaacaccaatc
agctttcattcacctttaagccagagttcgacacgagaagtccaagatgcgcaaattcct
ctccaaccggcccagcctactactttgaaggcccagtcaccgaaaaatgactgcgaatcg
cttccaccttccaaatcacaaattccttcatgtgcttctgccatcaatcagaatcatcgc
tcaaattatgaactgcttgatttttctatgcaccaaacacagagcacaaatcaggcccct
ttttcagctcctgttcctgcccctgcccctgctccagtaaataatgcagctggcttttac
ttgcaggtcaccaaagattcacagcaaggggcacgagtgcaaagtgagcctccacttcag
ccaccaacctcgaatccccctagagctcctagtaatcaatctagtaatggcccctctggt
ccctctaatccaactcatccagcttcacaatattatcctgccccacacgctacacctgtt
tctcaagccacatcatcctccacatatcttccacaatctggcgattctgttaatacacat
gacccccagcgtcccccatcttcacttgggagtcagcatggctttggtgtgccacctccc
atgcctcctgcacctggatttagcagctactacccagagtaccaagatggaagacatcct
ttcccacctccagacccaagggttcagaactactaccaggatgacgcgtatagaagagga
gatccaccgtatggccggtacaatggaccaaaccctggttatcgggaggcagaccgacag
ccagagaggccaagttctaggaccagtcagtactctgaccgacccaactccaggcagggg
tatgcagaagattaccccaggtctaatcgcagtgcctatgaagaatactatgcaaattac
tataagttcatggatcagaacaggtggtatgaccccaatgctatgtatgacccccgatat
cgaggctactatgatcagacttatggttggtataattatgaccctgaagcctacgggaga
gctgacccctactttagccaacagtattccaacaggcgtgaaggctatgatgacccatgg
cgttactatcctggctacgatgcaagtttcgatgatgactgtcgtcgtcgggacacatac
ggagatgagttggagcggcggtctgtccacagcgagagatcgacacacagccgccgcagc
agcttcagctctcgctcacagcagagtcaggtgtacaggagtcagccggatcttgttgct
gcgagttatgaagcaacagcgaccacaatgcctgcagattattcctattctcagtttcca
gagcagacagacaccctgaattacagccagtataatgctgagaactccacatgggctgcc
cctgaacaagctcctccaaggccactgactccggagaagtacgcggctcctcactgttgt
gctcgctttgggccagcaggtcagctgatctttgttcagcccaacctgccctcggccggg
cagcctgcccttgttgagattcatagcatagagaccatgatgcaggattttccagagcag
gcagagttacgtgccttcccagggccacttgtcaaggaggaaacccataaagtggacgtt
ataaagtttgcccagaataaagctcaggagtgcctgcgcaacgatgacctcattgacaaa
gactccgccttcctcatctgggaattcatcgtactgctgtgtcgacaaaatgggacggta
gttggcacggacatagctgatctcttgctgaaggaacatcgttctgtgtggttgccgggc
aaatcacccaacgaggcaaacctgattgacttcaacaatgaggcactggagcgggcagag
gaggaggggacagggccactctcacttttatcggacaccttcatgggcgtggcagaaaat
gttggcaaagagactgaacgcttccgagagctgctgctctttgggcggaaaaaggatgct
cttgaggccgctatgaaaaacgggctttggggccacgccctgctcttggccagtaaaatg
gacaaccgaacacatgcacgagtcatgaccaggtttgccaacagtcttcccattaacgat
ccactgcagacggtctaccagctcatgtcaggcaggatgcctgcttctgcctcgtgttgt
ggggatgagaagtggggcgactggcgtcctcacttagccatggttctttccaaccttaca
catgcactcgacttggacacacgcaccatctcgaccatgggagacacgctcgcttctaaa
ggtctgcttgatgctgcacatttctgttacttaatggctcaagtgggtttgggggtcttt
accaagaagagcaccaagatagtcctcattggctccaaccacagtcttccgtttgcaaag
ttttgttctacagaagctatccagaggacagaagcgtatgagtatgcacagtcactcggt
tcacagcctctttcactgccaaattatcaagtgtacaagttcatctacgcatgtcgtctg
gcagaggcgggcctttgtgctcaggcatttcactactgtgaggtcatttcccgagcactt
ctaaccttgcctacataccattcacctgttttcatcagtcagattatacagatgtctgag
cgattaaggttttttgacccccagctgaaggagaagccagagcaagagctcttccaggag
cctgaatggctactgcatttaagaacactcagtagccagatcaaggatggtgtgataatg
ttgcgcacagatcgcagtactcctcagccatctgcctgtactacgccaagctcagaggaa
caagctagtcctgttgaaacttcaacttttaactctgaccctcacaacccattaatgagc
acactgatgccccagcttggcccttctgcaccgggggtgcagctcatgccaccagctcca
actgctattttgcaagatgggtctgtttctctgcagcacggctctcccccaaatgagggt
gtcccatttaactctgcagtcactgcgcctccccagcctggctacatccctcaataccag
actgaggaccagggaccatactcatctttgccagcccaaagtcccactcttccacccccc
aacatgcctccccaaattccccaatacacacccatggaaattccacctcagctgcctcct
caaacaccatctcaaatgtctccccacatgtccccccacttttctccccatatgcctcct
catatgcctcctcatatgtccccccatctgcctccccataatccacaccaggttcctgga
gtaaatcctacacctactcctccatctccacagcagctccagccttcttcaccttcccat
ggtccaccttctcacatggacttctatgacaacatggcacagatgagtacaggaagaaga
tccagaacgacatcacaatcttcagtgcacaggatgcctggacgtcgctcacgcactacg
tcagagtcatccactcattcgacaggacgggagcgcagcaactctttagccaatcaaagc
tctcctcctccaccaataccagaggcccctgttcaggaagcacctaagaaaaacaagaaa
gactctcccaaaaagggaggaggtggaggcatcttcggctggatataccgaaggggaaag
aatgaagttcatttgccagatgacaagaacaaatctattgtttgggatgaaacgaagcag
aaatgggtgaatctggatgaaccagaagaggagaaaaagcctcttcctcctccaccatca
atgttcccaaatgctccaatggggggcaacatggggggcggaccaccaagcggaccagct
gcagggccatctgttaatatgttttccaggaaagcaggtactagggctcggtatgtggac
gtgtttaattcgggtcgtcggaactccaaccctgcacctgctgtcgctccacctgccgat
ctgtttgctcctcttgcacccatggccatgccagcgaacctcttcgttcccactgcagca
ccagacgatcgacaaccaatggagggaagtgttccagacagcaatggaaatacagaacac
attcagcccaatgctacaggtccacagatgtttaatccaactattttgccctcgggtccg
gaaggtgctcattctggagagctctcacgttctagttcaatgagttctttatcacgagaa
gtgagtcggcatttaaaccaggtccctacagaaataccggcccagggacctccgcccacc
gggggcgtgactttctataacccctcccagtttgcacaggccatgcccccagctcgttct
cgtctaggccggctgggacagcgcgagtacccaacactgaaatag
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