Silurus meridionalis (southern catfish): 124397782 Help Entry 124397782         CDS       T08004                                  Symbol msh6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism smeo  Silurus meridionalis (southern catfish) Pathway smeo03430   Mismatch repair Brite KEGG Orthology (KO) [BR:smeo00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     124397782 (msh6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:smeo03400]     124397782 (msh6) DNA repair and recombination proteins [BR:smeo03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      124397782 (msh6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II Motif Other DBs NCBI-GeneID:  124397782 NCBI-ProteinID:  XP_046723508 LinkDB All DBs Position 2:34661511..34669964 Genome browser AA seq 1365 aa AA seqDB search MAKQSSIFNFFTKSPPAVAKTKWNPNEAEASSAPRSSSFPGEETKSKTAAEKTCKTPKRV SHGKLFGQINSDTNRSSSFSFHAGDLVWARLEGHPWWPCMVVPQPLSGQQMRGRGQDQRV HVHFFDEPATRGWVRKQYIREYKGSDSAEAKSGGLFFSGKPVIRRAMELADSLLQDGPEQ RLKIPVCMDASDEESEDGEIMEVEKSTASDEEMSEEEVQKVKPSRRSSRAPAEHGQKPKR RRIVVASDSEGSGEEFKPDHAESSSEDEDEDVIVSDVEASGPESEPDSPVKPVKRKRASE KTAKTKTTTGPSEIFKSNPVTVAADTKSRLSAFSAPDSFESQGSASGNLDGTGVWDHEKL DWLQDGRRKDARRRRQSEEEYDPTSLYVPEDFLNRVTPGMRRWWQLKSEMFDTVLFYKVG KFYELYHMDAVVGVNELGLTFMKGTWAHSGFPEIGFGRFSDVLVQKGYKVARVEQTETPE MMEARCKAMARPTKFDRVVRREVCRIITRGTQTYSVLDGAPSEAESKYLLSVKEKNQVES TGQSHIYGVCFIDSSVGRFYVGQFQDDRHCSRLRTLVAHYVPAQVLFEKGNLSSETRKVF KAALSSAMHEGLNAGSQFWDAQKTLKTLADEDYFNKSEEENGSSSGSILPNALKSMTSES DSLGLTPKEGYELALSALGGCIFYLKKCLVDHELLSMANFQEYVPVDVEIQQSENAENFF AQTCQRMVLDGVTLANLEILQNGSTGGTEGTLLEQLDTCCTPFGKRLLKQWLCGPLCNPA SINDRLAALEDLMGAPAQATEVTELLKKLPDLERLLSKIHSMGTPMKGQDHPDSRAILYE EIVYSKRKIADFLSSLEGFKTMQEIVTIMESVSEGFQSKLLRQIVILKTRSDEGLFPDLE PELKRWDTAFDHQKARTTGVITPKAGFDPEYDQALTAIKECEGNLQDYLARQKKRLGCKN LSYWGTGRNRYQMEVPDSVSERNIPEEFEVRSTKKGWKRYATKEIERMFSEMQSWEDKRD AALKDCMRRLFYNFDKNYRNWQTAVECVSVLDVLLSLTRYSQSGNGIMVKPEIVLPGNGP HFSPFLDLRGSRHPCVTKTYFGDDFIPNDIFIGCSGNDDDEENMDKKAALAPCVLVTGPN MGGKSTLMRQCGLVVILAQLGCYVPAESLRLTPVDRVFTRLGASDRIMSGESTFFVELSE TASILLHGTLHSLVLLDELGRGTATYDGTAIASAVVKELSERICCRTLFSTHYHSLVEDY TQDRAVKLGHMACMVENECDEDPSQETITFLYKFISGACPKSYGFNAARLADIPEEVIQS GHRKAREFEKSTIALRIFKKVCSFAEDPTSDREQFARLVQMIDLC NT seq 4098 nt NT seq  +upstreamnt  +downstreamnt atggcgaagcagagctccatttttaatttctttacaaagtctcctccagccgtcgcgaaa acaaaatggaatccgaatgaagcagaagcttcttcagcccccagatccagcagtttcccc ggggaggaaaccaagagcaagacggccgcggagaaaacctgcaagaccccgaaaagagtc tctcatgggaaactatttggacaaataaattccgatacaaaccgaagctcttcgttctcc tttcatgcgggtgatctggtgtgggcgagactagaagggcacccctggtggccgtgcatg gtggtgccccagccgctgagtgggcagcagatgagaggcaggggccaagatcagagagtc catgtccatttttttgatgagccagcaacaaggggctgggtccgaaagcagtacattcgt gaatataaaggttcagacagtgctgaggccaaaagtggtggtttattcttcagtggaaag cctgtgattcgcagagcaatggagttggcagacagtctgctgcaggacggccctgagcag agactaaaaatacccgtctgtatggatgcatctgatgaggaatcggaggatggagaaata atggaggttgaaaaatcgacggcatcagatgaagaaatgtcagaagaagaggttcagaag gtgaagcctagcaggcgttcatcacgtgctccagcagaacacggccagaaacccaaacgt cggcgtattgtagtggcctctgacagcgagggctctggtgaggagttcaagccagatcat gccgaaagcagcagtgaagatgaggatgaagatgtgatcgtcagtgatgtggaggcgagc ggaccggagtctgaaccagacagtcctgtgaaacctgtaaaacggaaacgtgcatcagag aaaactgctaaaacaaagactacaactggaccttcagagatcttcaagagcaatcccgta actgttgcagccgacacaaagtcacgtctttctgctttttcagctccggacagctttgag agtcaaggcagtgcttcaggaaacctggatgggactggggtatgggaccatgaaaaactg gattggttgcaggatgggagaagaaaagatgctcggaggaggcgtcagtcagaagaggaa tacgacccgaccagtctgtatgtgcctgaagacttcctgaacagggttactcctgggatg cgtcgatggtggcagcttaaatcagagatgtttgatactgttcttttctataaagtgggc aagttttacgagctctaccacatggatgctgtggttggtgttaacgagttggggctgact tttatgaaaggcacctgggcacattctggtttccctgagatcggttttggacgtttctct gatgtgctcgtacagaaaggttacaaggtggcacgtgtagaacagacggagacccctgaa atgatggaagcacgatgcaaggctatggcacgtcccactaaatttgatcgtgtagttcgg cgagaagtctgcagaattatcacgcgtggcacccagacgtatagcgtactcgacggagcg ccatctgaggccgaaagcaagtatctcctgagtgtgaaagaaaagaatcaggtggaaagc acaggtcaaagccacatatatggggtctgcttcatcgatagctcagtgggtcgcttttat gtaggtcagttccaagatgaccgccactgttcgcgcctgcgcaccctagtggcacattat gtaccagctcaggtgctttttgaaaagggtaacttgtcatctgagacacggaaggtcttc aaggctgctctgtcctcagcaatgcatgagggtctcaatgctggctcacagttctgggat gctcagaaaaccctgaaaaccttggcagatgaagactactttaacaaaagtgaagaagag aatggtagttcttctggatcaattctccccaatgctctaaaatctatgacttctgaaagt gactcgctaggacttactcctaaagaaggttatgaacttgctctttctgcacttggaggc tgcatattctatcttaaaaaatgtctggttgatcacgagcttctttccatggctaacttt caggaatatgttccagtggatgtggagatccagcagtcggagaatgcagagaatttcttt gctcaaacttgccaacgcatggtgctggatggagtaacattggccaaccttgagattctc cagaatggttctactggaggcacagaaggtactctgcttgaacagttagacacttgctgc actccttttggaaagaggctgctgaaacagtggctctgtggtcccctgtgtaacccagct tccattaatgatcggttagctgctcttgaagacctgatgggtgctccagcacaagctact gaggttactgagctcctgaagaaacttccagaccttgaaaggttactcagcaaaatccac agtatgggcactcctatgaagggccaggaccacccagacagcagagcaattctttacgag gagatcgtttatagcaaacgcaagattgccgacttcctttcgtcactggaagggttcaaa accatgcaggaaatcgtgacgatcatggagtccgtctctgaagggttccagtctaaattg cttcggcaaatagtgattttaaaaacaagaagtgacgaggggctgtttcctgatctcgaa cctgagcttaaacgttgggacacggctttcgaccatcaaaaagcacgcacaactggtgtg atcacacccaaagctggctttgacccggagtatgaccaggctctgactgcgatcaaggaa tgcgagggaaatcttcaagactacttggctcgacagaagaaacgacttggctgcaagaat ctctcttactggggcacaggacggaaccgctatcaaatggaggttccagacagtgtttct gagaggaacataccagaagaattcgaggtgaggtctacaaagaagggctggaagagatac gcaacaaaggagatcgagcgcatgttctccgagatgcagagctgggaggacaaaagagac gctgcacttaaagattgcatgaggagactgttttacaactttgataaaaattacagaaac tggcagactgctgtggagtgcgtgtcggttctcgatgtgctgttgagtttgacccgatac agtcagagtgggaacggaataatggtgaaaccagagattgttctgccaggcaacgggccc catttttcccccttcctggacctccgaggatctcggcacccctgtgtaaccaaaacctat tttggcgatgacttcatccccaatgatatctttatcggttgttctggcaatgatgatgat gaggagaacatggacaagaaggcggcactggccccatgtgtacttgtcacagggccaaac atgggaggcaaatcgactctgatgagacagtgtggcctggttgtgatcttggcccagttg ggctgctacgtacctgctgaaagcctgcgtctaactcctgtggaccgagtgtttactcgc cttggtgcctcagatcgcatcatgtctggagagagtactttctttgtggagctcagtgaa acagccagtatccttttgcatgggacccttcattcacttgttcttctggatgaactgggc aggggtacggccacctacgacggcacagccattgcgagtgctgtggtgaaggagctttct gagaggatctgctgcagaactctgttctccacccactaccactcactggtagaagactac actcaggaccgggctgttaaacttggtcatatggcctgcatggtggagaatgagtgtgat gaggatcctagtcaggagaccatcactttcctgtacaagttcatcagcggtgcttgtccc aaaagctacggcttcaacgcggcacgccttgctgatatccctgaagaggtgattcagtca gggcaccgtaaagctcgtgagtttgagaagagcaccatcgctctgaggatcttcaagaaa gtgtgttcgtttgctgaagatcccacgtctgaccgtgaacagtttgccagactggttcag atgattgatctttgttaa

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