Silurus meridionalis (southern catfish): 124397790
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Entry
124397790 CDS
T08004
Symbol
fbxo11a
Name
(RefSeq) F-box only protein 11a isoform X1
KO
K10297
F-box protein 11
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124397790 (fbxo11a)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124397790 (fbxo11a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
F-box
zf-UBR
zf-UBR_1
F-box_COS111
B0563_1_N
Motif
Other DBs
NCBI-GeneID:
124397790
NCBI-ProteinID:
XP_046723521
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All DBs
Position
2:complement(34670563..34683250)
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AA seq
879 aa
AA seq
DB search
MNSGRAANRRPRRVSRPGPVPPDRNHPERDEEAAEDMVAEDSGPGPQNSPYQLRRKSLLP
KRSVYPAKTNMEGDSTSTTELFGHRAKRARVSSKPQDITAAPAEQYLQVKLPDEVVLKIF
SYLLEQDLCRAACVCKRFSELANDPILWKRLYIEVFEYVRPMMHPDSGTFYQINPEEYEQ
PNPWKESFQQLYKGAHVKPGFAEHFYSNPARYKGRENMLYYDTIEDALGGVQEAHFDGLI
FVHSGIYTDEWIYIESPITMIGAAPGKVADKVVIENTRDSTFVFMEGSEDAYVGYMTIKF
NPDDKSAQHHNAHHCLEITVNCSPIVDHCIIRSTCTVGSAVCVSGQGACPTIRHCNISDC
ENVGLYITDHAQGIFEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRDVGVFTFDHGMGY
FESCNIHRNRIAGFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFIENKIYANNFAGV
WITSNSDPTIRGNAIFNGNQGGVYIFGDGRGLIEGNDIYGNALAGIQIRTNSCPIVRHNK
IHDGQHGGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRRNRIHSGKQVGVYFYDN
GHGVLEDNDIYNHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGLGLIEDNEIFDNA
MAGVWIKTDSNPTLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQAGVLISTNSHPAL
RKNRIFDGFAAGIEITNHATATLEGNQIFNNRFGGLFLASGVNVTMKDNKITNNQDAIEK
AVSRGQCLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFC
DCGAGTLSNPCTLAGEPTHDTDTLYDSAPPIESSTLQHN
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaactcggggagagctgcgaaccgcagacccaggcgagtgtcgaggccgggcccggta
ccgccggacagaaaccatccagagagagatgaagaggctgctgaagacatggttgctgaa
gattctggcccaggacctcagaatagtccttatcaacttcgaagaaagtctcttttaccc
aaaagatctgtatatccagccaagactaatatggagggtgattccacatcaacaacagaa
ctctttggtcatcgggccaagcgtgccagagtgtccagcaaacctcaagatataacggct
gctccagcagagcagtacctgcaagtgaagcttccagatgaggtggtgctgaagatcttc
tcctatctgctggagcaagatctctgtcgggctgcttgcgtgtgcaaacgcttcagtgag
ctcgccaacgatcccatactgtggaagagactctatatagaggtttttgagtacgtccgt
cccatgatgcacccagactcagggacattttaccaaattaatcccgaggagtatgagcag
cccaatccatggaaggagagctttcagcaactgtataaaggagcacatgtgaagccaggc
tttgcagaacacttttacagtaatcctgccagatataaagggagagagaacatgctgtat
tatgacactattgaggatgcattaggtggcgtacaggaggctcactttgatgggcttata
tttgtccactcagggatttacactgatgagtggatctatatagagtcaccaatcacaatg
attggtgcagcaccaggaaaagtagcagataaagttgttattgaaaacactagagattca
acatttgtgttcatggaggggtcagaagatgcatatgttggctatatgacaataaagttt
aaccccgatgacaagtctgcacagcatcacaatgcacatcactgtttagagatcacggtt
aactgcagccccatcgttgaccactgcatcatacgcagtacatgcacagtgggttctgca
gtatgtgtgagtggccagggagcatgtcccactatcagacactgtaacatcagtgactgt
gagaatgtcggcctgtacatcacggaccacgcacagggcatttttgaagataatgagata
tccaacaatgctttggctgggatctgggttaagaatcatggaaatcccatcattagacgg
aatcacatccaccatggtagagatgtgggagtctttacttttgaccatgggatgggttat
tttgaaagctgcaacattcatagaaatcggatagcaggattcgaagtgaaggcatacgct
aaccccaccgtagtgcgctgtgaaatccatcatggacagactgggggcatatatgtacat
gaaaagggcagagggcagttcattgagaacaagatctatgcaaacaactttgctggtgta
tggattacctcgaatagtgaccctaccatcaggggtaatgcgatctttaacggcaatcaa
ggaggtgtttacatattcggcgacggcaggggtcttattgaaggaaatgacatatatgga
aacgccttggcagggattcagatccggaccaacagctgccctattgtccggcacaacaag
atccatgatggccaacatggaggcatttatgtgcatgagaaaggccaaggtgtgattgag
gaaaatgaagtgtacagtaacacattagcgggtgtgtgggtaaccacaggaagcactcct
gtactgcgcaggaatagaatacacagtgggaaacaggttggtgtttatttctatgataat
gggcatggagtgctggaagacaatgacatctacaaccacatgtattccggagttcagatc
aggacaggaagcaacccaaaaattagacgaaacaaaatctggggtggacaaaatggtggc
atcctcgtttacaactcgggtttgggattgatagaagacaatgagatctttgacaacgcc
atggcaggggtttggatcaagacagacagcaacccaacacttcgtcggaataagatccac
gatgggagagatggaggaatttgcatattcaatggaggacgagggttactggaggagaat
gacatcttcaggaacgcccaggcaggagtcctcatcagcaccaacagtcacccagcactg
cggaaaaacaggatatttgatggctttgctgcaggtattgagatcacaaaccatgcgacg
gcaactttagaaggaaatcagatttttaacaaccgctttggtggtttgtttcttgcttct
ggtgtcaatgtgaccatgaaagataataagataacgaacaatcaagacgccattgagaaa
gctgtgagccgaggacagtgcctgtataagatttccagctacaccagctatccaatgcat
gacttttacagatgtcacacctgtaacacgacagaccgcaatgcaatttgtgtgaactgc
atcaagaaatgtcaccaaggacatgatgtagagtttattagacacgataggtttttctgt
gactgtggtgctggaacactttccaacccatgcacgttggccggagagccgacacatgac
acggatacactgtacgactctgctcctcctatagagtccagcacactgcagcacaactga
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