Silurus meridionalis (southern catfish): 124397794
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Entry
124397794 CDS
T08004
Symbol
gria1b
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor 1b
KO
K05197
glutamate receptor 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
smeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124397794 (gria1b)
04082 Neuroactive ligand signaling
124397794 (gria1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124397794 (gria1b)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
Glutamate (ionotropic)
124397794 (gria1b)
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Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
124397794
NCBI-ProteinID:
XP_046723533
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Position
15:19890453..19980594
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AA seq
919 aa
AA seq
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MEPSLALLLTSLLGWCSCSSFPSNINIGGLFPTDSHEYEVFRFALSQQHELPKLVPQVDM
VDVGSSFAMTYAFCSQFSKGVYAIIGLYDKKTMNMLMSFCGALHVCFVTPSFPIDTNNQF
VIQLRPQLQDALVGLVEHYKWTKFVYMYSSDSGLTVLQKILDTAAEKGWQVTSINFDTLT
EAAFLNSIQDLDSKKEHKIILDCEXERLNSILNLIAAQRKNLKNYHFILANLGFLDLNLT
DFRKGGANITGFQLMNYTDPMVSRTIDDWLEFDSKDLKSPKRRLKYTGALTYDGVSVMAT
AFQNLRRQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVQFEGLTGHVQFNEKGHRT
NFTVNVMEIVPTGPKKVGYWNENEKYVSTATYAHVLNETFGMHNRTYIVTTILESPYVML
KKNHEQLVGNDKYEGYCVELAAEIAKHVGYSYKLELVHDGKYGARDPDTKMWNGMVGELV
YGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMC
IVFAYIGVSVVLFLVSRFSPYEWHSDDYEDCGEQQSQNRSPSPEAGQSQSQGQHGQNPGQ
QDKQEKPPEHSNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYT
ANLAAFLTVERMVSPIESAEDLAKQTDIAYGTLDGGSTKEFFMRSKIAVFEKMWSYMKFA
DPSVFVKTTDEGVVRVRKSKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKG
SDLRNRVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYIL
IGGLGLAMLVALVEFCYKSRIQSRRMKQIIDAAMLGSSLSHMGSGGENGRVVAHDFPKAA
QTLPCMGQASGMGINTSGM
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggagccaagcctggctttactgctcaccagcttgctcggctggtgctcgtgctcgagt
tttccaagtaacattaatataggcggtttgttcccaaccgactcgcatgagtacgaggtg
tttcggttcgcgctgtctcagcagcacgagctccccaaactggtgccacaagtggacatg
gtggacgttggcagcagtttcgccatgacatacgcattttgttcccaattctctaaagga
gtctacgccatcatcggtctctatgacaagaagaccatgaacatgttgatgtcattctgt
ggggctctgcatgtgtgctttgtcacacccagcttcccaatcgacaccaacaatcagttt
gtaatccagctcaggcctcagctccaggatgctctggttggccttgtggaacactacaag
tggaccaaatttgtctacatgtatagctcggattcaggactgactgtgctacagaagatc
ctggatacagctgcagaaaagggctggcaagtgacatccatcaactttgatactcttaca
gaggcagcctttttaaactcaatccaggacttggacagcaaaaaagagcacaagatcatc
ctggactgcgagnctgagagacttaactccattcttaacctgattgcagcgcaaagaaaa
aatctgaagaattatcactttatcctggcaaacctgggctttctggacctgaatttgacg
gatttcaggaaaggtggtgccaacatcacaggcttccaactaatgaactacacagacccc
atggttagccggaccatagatgactggctggagtttgacagcaaagacctgaagagccct
aagaggagactcaagtacacaggggcactcacttacgatggcgtaagcgtcatggccact
gctttccaaaacctcaggaggcagcgtatcgacatttcccggcgggggaatgccggcgaa
tgtctggccaaccctccagcaccgtggggccaaggcatcgacattcagagagccctccaa
caggtgcagtttgaaggtctaacaggccacgtgcagttcaacgagaaaggacatcggaca
aactttacagtaaacgtaatggagatcgtccccactggacctaagaaggtgggctactgg
aacgaaaacgagaagtacgtgagcacggcaacgtacgcccacgtgctcaacgagacgttc
ggcatgcacaataggacatacatagtcaccaccattctagaatctccatatgtgatgctg
aagaaaaatcacgagcagctggtggggaacgataagtacgaggggtactgcgtggagctg
gccgctgagatcgccaagcatgtcggctactcctacaagctggaacttgtacacgacggc
aagtacggtgcccgggaccctgataccaaaatgtggaacgggatggtcggagagctggtg
tatgggaaagccgatgttgccgtggctccgctcaccatcactctggtccgagaagaggtc
atcgacttctccaagcccttcatgagcttgggcatctctatcatgatcaagaagcccacc
aaatccaaaccgggtgtcttttccttcctggacccgcttgcctacgaaatctggatgtgt
atagtgtttgcatacatcggcgtgagcgtggtcctgttcctggtgagccgcttcagcccg
tacgagtggcacagcgacgactacgaggactgtggcgagcagcagagccagaaccggtct
ccgtctccagaagcaggacagtcgcagtcacagggtcagcacggacagaaccccggccaa
caggacaagcaggagaaaccacccgagcacagcaacgagttcggcatctttaacagcctg
tggttctctctgggtgccttcatgcagcaaggctgtgatatttcacccagatccctctca
ggtcgtatagttggaggtgtctggtggttcttcaccctcatcatcatctcctcctacaca
gccaacctggctgcctttcttactgtagagagaatggtgtcacccattgagagcgcagaa
gacctggccaagcagactgacattgcgtacggcaccttggatggaggatccaccaaagag
ttcttcatgagatcaaagatagccgtgtttgagaagatgtggtcctacatgaagtttgca
gatccctcagtgtttgtaaagaccaccgatgagggtgtggtgagagtgcgcaaatccaaa
tacgcttatttgctcgaatccaccatgaatgaatacatcgaacagcgcaaaccctgcgac
accatgaaggtgggcggaaacctggactccaaggggtatggggtcgccactcctaaagga
tctgacctcagaaaccgagtaaacctggcagtgttaaaactgaacgagcagggcctgttg
gacaaattgaaaaacaaatggtggtacgacaagggcgagtgcggcagcgggggaggtgat
tccaaggataagaccagtgccctgagcctcagtaatgtggcaggggttttctacatcctg
atcggaggcctggggctggccatgctggtggcattggtcgagttctgttacaagtccaga
atccagtcccggagaatgaagcaaattatcgacgcggcgatgttgggttccagcctgagc
cacatgggcagcggaggggagaacggccgggtggtggcacacgattttcccaaagcggca
cagactctgccctgcatgggccaagcgtcgggcatgggcatcaacaccagcggtatgtaa
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