Silurus meridionalis (southern catfish): 124397823
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Entry
124397823 CDS
T08004
Symbol
ank1b
Name
(RefSeq) ankyrin-1 isoform X1
KO
K10380
ankyrin-1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124397823 (ank1b)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
124397823 (ank1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
UPA_2
ZU5
Ank_KRIT1
ANK_LRRK2
Death
Motif
Other DBs
NCBI-GeneID:
124397823
NCBI-ProteinID:
XP_046723596
LinkDB
All DBs
Position
15:11467939..11556801
Genome browser
AA seq
1726 aa
AA seq
DB search
MAQAAKQLRKNKDLAEAAAQELREKEEEKIKKRNRSKDRRRKADTSTSFLRAARSGNLDK
ALDHIKNGININIANQNGLNGLHLASKEGHVKMVLELLHNGIDLEGTTKKGNTALHIAAL
AGQEKVVAELVHYGANVNAQSQKGFSPLYMAAQENHLEVVKFLLENGANQSLPTEDGFTP
LAVALQQGHENVVALLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGF
TPLHIAAHYENLSVAQLLLNRGANVNFTPKNGITPLHIAARRGNVIMVRLLLDRGAQIDA
RTKDELTPLHCAARNGHVRVIEILLDQGAPIQAKTKNGLSPIHMAAQGDHMDCVRQLLQY
NAEIDDITLDHLTPLHVAAHCGHHRMAKVLLDKGAKANARALNGFTPLHIACKKNHMRSM
DLLLKHSASLEAVTESGLTPLHVAAFMGHLNIVKCLLQRGASPNASNVKVETPLHMAARA
GHCEVAQFLLQNSAQVDAKAKDDQTPLHCAARMGHKELVKLLLEHKANPDSATTAGHTPL
HITAREGHAHTTRILLDGNAQQIKMTKKGFTPLHVACKYGKVDVAELLLDRGANPNAAGK
NGLTPLHVAVHHNNLDVVKLLVSKGGSPHSTARNGYMPLHIAAKQNQLEVASCLLQSGAN
SNVESLQGITPLHLAAQEGRPDMVALLISKQANVNLGNKSGLTPLHLVAQEGHVGIADML
VKQGASVYAASRMGYTPLHVACHYGNIKMVKFLLQQQAHVNSKTRVGYTPLHQAAQQGHT
DIVTLLLKHGALPNEITTNGTSPLGIAKRLGYISVIDVLKLVTEESVSVITTDKHRMSFP
ETVDEILDVSEDEGAAPLTLGDELLGMDGARYLKLDDLKDQDDDFLSPKKSLREFESGMG
TTPYSPAIPRIPCVSPETVMLDQHTPIPLPKEYDEDSLIPSSPATETSDNVSPVASPIHT
GFLVSFMVDARGGSMRGSRHNGLRVIIPPRTCAAPTRITCRLVKPQKLTTPPPLVEGEGL
ASRIISLGPSSMQFLGPVIVEIPHFASLGRGDRELVVLRSENGSVWKEHRSRYGDNMLET
ILNGMDEDLEIQEELEKKRIRRIISTDFPLYFAVVSRVQQESDLIGPEGGQLISKLVPQV
QAIFPETAVTKRVRLGLQAQPIPDELLTRHLGNQATFSPVVTVEPRRRKFHRPIGLRIPL
PPSWRESPRDAGEGDTTSLRLLCSVIGGTASAQWEDITGTTKLMYSNNCANFTTNVSARF
WLADCPRTAEAVTFANLLYRELTAVPYMAKFVVFAKMNEAREGRLRCYCMTDDKMDKTLE
LHENFTEVARSRDIEVMEGMPLHLECSGSLVPVRKATQQPRTFSFQAFRDNRLPVSVKVR
DSNKESTGFLTFLRKSTKYEDAQHVLCNLNITMPPCVKVAGGEERRRTLTPLALRERYSA
LGESGLAAVNTLERTELKISLITEQLGLSWTELARELQFSIDDINRIRVENPNSLLDQST
ALLNLWGIREGKRAQTVENLYGALKNIDRSDIVKSLEDPVPQAIPEAGMEGACRLAERDS
TLLSPSVVNGQQIYAQLREKTGLSRAIEHNGDRLSSGAFQPFLPEKAIECVLEQSQARVA
QEALLTPVRDTGQSELLHGRFMGTQPFEKGLGFSHQDAHKAQRDEPIGFTSECLSEEQFT
DEHGNVVSKGRTFTAKPSFTQIHLGDRTRRETPERQDDGKKMEGGE
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagccgccaagcagctccgcaagaacaaggacctagccgaggctgcggcccag
gagctgagggagaaagaggaggagaagatcaagaagaggaaccgctcaaaggaccgtagg
cgcaaggcggacacttcgaccagctttctgcgtgcggcacgctcaggtaatctggacaag
gctctggatcacataaaaaatgggataaacatcaatatagccaatcagaatggacttaac
gggttgcacttggcttcaaaagaaggtcatgttaagatggtgctggagctgctgcacaat
gggattgacctagaaggcactacaaagaaaggaaatactgcactacatattgctgcactg
gctggtcaagagaaggttgttgccgagctagtgcactatggtgccaatgtcaatgcccag
tctcagaaaggtttcagtcccttatacatggcagcacaggagaaccacttagaggtagtg
aagttccttttggagaatggagccaatcagagcctccctactgaagatggcttcacacca
ctggctgtggctttgcagcaaggtcatgagaacgtagtggctcttctcattaactatgga
acgaagggtaaagtgcgcctgcccgctcttcacatcgccgctcgcaatgatgacacgcgc
actgcagctgtgctgctacagaatgaccccaatccagacgttcttagcaagactgggttc
actccactccacatcgcagcacattatgagaatcttagtgttgcacagctgttgttaaac
aggggagccaatgtgaacttcacgccaaagaatggcattactcccttgcatattgctgcc
cgaaggggaaacgtgattatggtacgactactcttggacagaggagcacagatagatgcc
aggacaaaggatgagctgaccccactacactgtgctgccaggaatggccatgtgcgagtc
atcgagatcctcttagaccagggagctcccatccaggccaagactaagaacggcttgtct
cccatacacatggcggcacaaggtgatcacatggactgtgttcgccagcttctgcagtac
aatgctgagattgacgacatcactctggaccacctgacacctctgcatgtagcagcacac
tgtggtcaccaccggatggctaaggttctgctggacaaaggagccaaggctaatgcccgt
gccctgaatggctttacacctttacatattgcctgcaagaagaaccacatgcgctccatg
gacctactgctcaagcattcagcatctctggaggcagtgactgagtctggtctaactcca
ctccatgtggctgcatttatgggacacctcaacatagtaaaatgtcttctgcagagagga
gcctctcccaatgcatctaacgtgaaagtggagactccattgcacatggctgctcgggca
ggacactgcgaggtggctcagttcctgctgcaaaactcagcccaggtggatgctaaagct
aaggatgatcagacgccactgcactgtgcagctcggatgggacataaagagctggtcaag
ctgctcttagaacacaaggctaatcctgactcagctactacagctggacacacacctctg
cacatcaccgcccgtgagggacacgcccatacaacacgtattctcctagacggcaatgcc
cagcaaatcaaaatgactaagaaaggctttactcctctacatgtggcatgcaagtatggg
aaagtagatgtggcagagctgcttctggacagaggagcaaacccaaatgcagcaggaaag
aatggactaacacctctacacgtggctgtccatcacaacaacctggatgtggtcaagctg
ctggtcagcaagggcggatctccacacagcacagctagaaatggatacatgccactacac
attgctgctaagcagaaccagttggaggtagccagctgtctgctacagtctggagctaat
tccaatgtggagtctctacaaggcatcacgcccctccatttggctgctcaagagggacgg
cctgacatggtggccttgctcatttccaaacaggccaacgtcaacctcgggaacaagagc
ggtctgacaccactgcacctggttgctcaggaggggcatgtaggcatcgcagacatgttg
gtgaagcagggtgcctcagtctatgcagcttcaaggatgggatacacacccttacatgta
gcatgtcactatggcaacataaagatggtgaagttccttctacaacaacaagcacatgtt
aacagcaagaccagagtgggctacactccactccatcaggcagcccagcaaggtcataca
gacatcgtcactctcctcctgaaacatggagctctgcctaatgagatcacaactaatgga
acgtcgcctttgggcatcgctaagcgactgggatatatctctgtcattgatgtcctcaag
ttagtgactgaggaatctgtgtccgtaatcaccactgataagcatcgcatgagtttccca
gagacggtggatgagatcttagatgtctcagaggatgagggagctgcaccgctaacatta
ggcgatgagctgttgggaatggatggtgctcgctacctgaagctagatgacttgaaggac
caagatgacgactttctttcaccaaaaaaatctctaagggagtttgagagtggaatgggc
acaacaccctactcacctgctattcccagaattccatgtgtatctccagaaactgtcatg
cttgaccagcacactcctatccctttgcctaaggagtatgatgaggactctcttatcccc
agtagtcctgccacagaaacctcagacaatgttagcccagtggccagccccatccacact
gggtttctggtgagttttatggtggatgcaagaggtgggtctatgcgtggcagcagacac
aatggcctgcgggtgatcataccccctcgtacctgtgctgctccaacacgcatcacctgc
cgtctggtcaaaccacagaaactcacaacccctcctcccctggtggagggagaaggcctt
gcttcacgcattatctctttgggaccatccagcatgcagttcctggggccagttattgtg
gaaattcctcactttgcttcactgggaagaggtgatcgagagctggtggtgctgcgcagt
gagaatggttcagtctggaaagaacaccgaagccgatatggcgacaacatgctggagact
attctgaatggcatggacgaagatctggagattcaagaggagctagagaagaaaagaatc
cgcagaatcatctccactgatttccccctttactttgcggtggtgtcgcgtgttcagcaa
gagagtgatttgattggtccagaaggtggtcagctgatcagtaagttggtcccccaggtt
caggctatcttccctgagacagcagtcaccaaacgagtgcgactgggcctgcaggctcag
cccatcccagacgagttgctgactcggcacttagggaatcaggccacgttcagccctgtg
gtgacggtggagccacgcagacgcaagttccatcggcccatcggcctgcgcatcccccta
cccccctcatggagggagagtccacgcgatgctggtgaaggggacaccaccagcctgcgc
ctcctctgtagcgtcattggtggtacagcttcagctcagtgggaggacatcactggcacc
actaaactcatgtactccaacaattgtgccaacttcaccaccaatgtgtcagcaaggttc
tggctagccgactgtcctcggacagcagaagctgtgacttttgccaacctgctgtaccgg
gaactgacggccgtgccctacatggccaagtttgtggtgtttgctaagatgaacgaggcg
cgtgagggccgcctgcgctgctactgcatgaccgacgacaaaatggacaaaaccctggag
ctacatgagaacttcaccgaggtggcacgtagccgagacatagaggtaatggaagggatg
ccgctgcacttggaatgctctggaagccttgtgccagtgaggaaggccacacagcaacct
cgcacattcagttttcaggccttcagagacaacaggcttcctgtttctgtgaaggtaaga
gacagcaataaggaatccacaggattcctgactttcctccgcaagtccaccaaatatgaa
gatgcacagcatgtgctgtgtaacctcaacatcaccatgcccccctgtgtaaaggtggca
ggtggggaagagcgcagacggactttgacaccactggccctgagggagaggtacagcgcc
ctgggcgaatcgggactggctgcagtgaataccttggaaaggacagagctgaagatttca
ctgatcactgagcagctgggtttaagctggactgaactggccagagaactgcagttcagt
attgatgacattaacaggatacgagtagagaatcccaactcccttctggaccagagtaca
gctctgctcaacctgtggggtattcgagagggcaagagagcccagacagtggaaaacctg
tatggggcattgaagaacattgaccggtcagacattgtgaagtccctggaggatccagtg
ccacaggcaatacctgaggcaggaatggagggagcctgcaggctagctgagcgtgactcc
accctgctctctcccagtgttgtcaatgggcaacagatctacgcccagctgcgtgagaaa
actggactgagccgagcaattgagcacaacggagacaggttaagtagtggtgcatttcag
cctttccttccagagaaggccattgaatgtgtgctagagcagagccaggcccgtgtggcc
caagaagccttgctcactccggtacgtgacacgggtcagtctgagctcctgcatgggaga
tttatgggcactcagccttttgagaaggggcttggattctcgcatcaggatgcacacaaa
gcacagagagatgagccaattggtttcaccagtgagtgtctgagtgaggaacagttcact
gatgagcatggaaatgtggtcagcaagggtcggacattcactgccaaaccttccttcact
caaatacatttgggagacagaacgagacgagagacacctgagaggcaggatgatgggaag
aaaatggaaggcggtgaatga
DBGET
integrated database retrieval system