Silurus meridionalis (southern catfish): 124397824
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Entry
124397824 CDS
T08004
Name
(RefSeq) core histone macro-H2A.1
KO
K11251
histone H2A
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03082
ATP-dependent chromatin remodeling
smeo04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124397824
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
124397824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124397824
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124397824
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
124397824
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124397824
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Macro
Histone_H2A_C
Histone
Clp_N
YihI
Motif
Other DBs
NCBI-GeneID:
124397824
NCBI-ProteinID:
XP_046723601
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Position
15:complement(84832..101189)
Genome browser
AA seq
364 aa
AA seq
DB search
MSSRGGKKKLTKTSRSVRAGVIFPVGRMLRYIKHNLPKYRIGVGAPVYLAAVLEYLTAEI
LELAGNAARDNKKGRVTPRHILLAIANDEELNQLLKGVTIAAGGVLPNIQPELLAKKRGS
KGKLEVVASPPLAKNKSTKKPPTTKRNPNKKSSRVKRRGDGSKAVSADSTTDSPSDGFTV
LSSRSLFLGQKLQVVQADISSINSDAVVHPTNSTFHTGGEVGSALEKKGGKEFCEAVLEL
RKKNGPLEVAGAAMTSGYGLPAKFVIHCNSPGWGSDKCEELLDKTVKNCLALADEKKLKS
VAFPSIGSGRNGFPKQMAAQLILKAINSYFVSTMSSSIKNVYFVLFDSESIGIYVQEMAK
LDSK
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtcgaggagggaagaagaagttgacgaagacgtcacgctcggtgagagcagga
gtgattttccctgtgggtcgaatgctgaggtacatcaaacacaacctccccaaataccgc
atcggggtcggagctcctgtttacctcgctgcagtgctggagtacctcacagctgaaatt
ctggagttagcaggtaatgcagctcgtgacaataagaaaggtcgagtgactccacgtcac
atcctcctggccatcgctaatgatgaggagctcaatcagctgctgaaaggtgtgacgatt
gctgcaggaggagttttaccaaacatccaacccgaactgcttgccaagaaacgaggctct
aaaggtaaattggaggttgtggcgtcgcctccactggccaagaacaaaagcaccaaaaaa
ccaccaaccaccaaaagaaaccccaacaagaaatcatccagagtgaagaggcgtggggat
ggcagcaaagcggtgagtgcagacagcaccacagactctccttctgatggcttcacagtt
ctctcgtctagaagcctcttcctgggacagaagctgcaagtcgtacaagctgatatttcc
tccatcaacagtgacgctgtcgttcatcccaccaactccaccttccacacaggtggagaa
gtagggagtgcgctggagaagaaaggtggaaaggagttttgtgaagcagtgttggagctg
cgcaagaagaacggccctctggaggtggctggagcggcgatgacgtcaggttacggcctt
ccagcaaagtttgtgatccactgtaacagtcccggctggggctcagacaaatgcgaggag
cttctggacaaaaccgtgaagaactgcctcgctctggctgacgagaagaaactcaaatct
gtggcgtttccctccataggcagcggcaggaacggttttccgaagcagatggccgctcag
ctgatactgaaagccatcaacagctacttcgtgtcaaccatgtcgtcctccatcaagaac
gtctacttcgtactgtttgacagcgagagcatcggcatctatgtccaggaaatggccaaa
ctcgactccaaataa
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