Silurus meridionalis (southern catfish): 124397905
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Entry
124397905 CDS
T08004
Symbol
rab39ba
Name
(RefSeq) RAB39B, member RAS oncogene family a
KO
K07925
Ras-related protein Rab-39B
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124397905 (rab39ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124397905 (rab39ba)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
smeo04031
]
124397905 (rab39ba)
Membrane trafficking [BR:
smeo04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
124397905 (rab39ba)
GTP-binding proteins [BR:
smeo04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
124397905 (rab39ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
AAA_22
TniB
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-GeneID:
124397905
NCBI-ProteinID:
XP_046723733
LinkDB
All DBs
Position
15:17748450..17753685
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AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFLL
VGHKCDLEPQRQVSQQEAEKLAAAYGMRYVETSARDAINVERAFTELTRDIFELVKQGDI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaagctatatggctataccagttccgattgattgtcattggcgactcgaccgtgggc
aaatcttgtctgatcagacgtttcacagaggggcgttttgcacaggtgtcggaccccact
gttggagtggatttcttctcccgcctggtggagatcgaaccaggcaaacgcatcaaactg
cagatctgggacacagctggacaagagaggttcaggtctatcaccagagcttactaccgt
aattcagtaggtggcctactgttgttcgacatcaccaatcgacgctccttccagaatgtc
cacgagtggctggaggaggcgcgcagccatgtgcagccacacagcatcgtcttcctgctg
gtgggccacaagtgtgacctggagccgcagcggcaggtgagccagcaggaagcggagaag
ttggcagcggcctacggcatgcgctacgtggagacatcggcacgtgacgctattaacgtc
gagcgggctttcaccgagctgacacgtgacatcttcgagctcgtcaagcagggcgacatc
accatccaagaaggctgggagggggtgaagagtggctttgtgcccaatgtggtgcactcg
tctgaggaagtgaccaagagtgatcgccgctgcctgtgctga
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