Silurus meridionalis (southern catfish): 124397931
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Entry
124397931 CDS
T08004
Symbol
pou5f3
Name
(RefSeq) POU domain, class 5, transcription factor 1
KO
K09367
POU domain transcription factor, class 5
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124397931 (pou5f3)
03021 Transcription machinery [BR:
smeo03021
]
124397931 (pou5f3)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
124397931 (pou5f3)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
124397931 (pou5f3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
CytochromB561_N
Stevor
Motif
Other DBs
NCBI-GeneID:
124397931
NCBI-ProteinID:
XP_046723781
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All DBs
Position
15:5435990..5440679
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AA seq
476 aa
AA seq
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MSDRPESPPEDCSNRAYELSRSMSSYSSAPGHEGLQFAHSMLQDPGLLFNKAPFNGLNAA
HTQTFFSFPPVGGDFRHNEAQVVDFTQPKHWYPFTAPEYTGQVAGATATTQPSNLSPPIA
ETREQIKMPEVKTEKDGSEEYGGAETKGQAHFVGPATTVPAGVYYSTSAPWTPSFWPGLT
HLTGATAVAQAPPTPSASSPSLSPSPPGNGFGSSGFYSGATGQSSANAAAAQVQNSGRSS
GSSSGGCSDSEEEETLTTEDLEQFAKELKHKRITLGFTQADVGLALGNLYGKMFSQTTIC
RFEALQLSFKNMCKLKPLLQKWLNEAEASENPQDMYKVERVFVDTRKRKRRTSLEGSVRT
ALESYFLKCPKPNTLEITHISDDLGLERDVVRVWFCNRRQKGKRLALPFDEEGAEGQYYD
QSPTPPPHMGGAHITGQGYPGPGHPGAMPTLYMPPLHRPEVFKQALHPGLVGHLSS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatcgcccagagagtcctccagaagactgcagtaaccgggcatacgagctctcc
aggtccatgtcctcgtactcctcagcgccgggacatgaaggcctgcagtttgcgcacagc
atgctccaagatccgggcctgctcttcaacaaggcgcctttcaacggcctcaatgctgct
cacacacagaccttcttctctttcccaccggtcggtggagatttcaggcacaacgaggcg
caggtggttgatttcacgcagcccaaacactggtacccgtttacggcccctgagtacacg
gggcaggtggcaggggccactgcgaccacgcagccctcgaacctgagtcctcctattgct
gaaacacgggagcaaatcaagatgcctgaggttaaaaccgagaaggatggaagtgaagag
tacggcggcgctgagaccaaaggtcaggcacattttgtcggcccggcaaccaccgtgccc
gccggcgtgtattactccacttctgccccgtggactccgtctttttggcctggcctcact
catctcacaggggcgactgctgtggctcaagcgcctccgaccccgtccgcgtcctcacct
tctctatccccgtctccgcccgggaatgggttcggcagctctggcttttacagcggagcc
accgggcagagcagcgccaacgccgccgccgcccaagtgcagaacagcggccgcagcagc
ggctcctccagcgggggctgcagtgactccgaggaagaggagactttgaccacagaggat
ctggagcagtttgccaaggagctgaagcacaagcgaatcacactcgggttcacgcaggcg
gatgtcggccttgcgcttgggaatctctatgggaagatgttcagtcagacgaccatctgt
cgcttcgaagcgcttcagctcagctttaaaaatatgtgcaagctcaaaccgctgctccag
aaatggctgaacgaagcagaagcgtcagaaaacccacaagatatgtacaaagtcgagcgg
gtttttgttgacacgagaaagcgaaaaaggaggaccagcttggagggttcggtccgcact
gcgctcgaatcctactttctcaagtgtcccaagcccaacacgttggaaataacgcacata
tctgacgatctcggcttagaaagagacgtggtgcgtgtgtggttctgtaaccgcagacag
aaaggcaagcgactggctctacctttcgacgaagagggcgccgagggccagtactacgac
caaagtccgacgccgcctccccacatgggcggtgcacacatcacgggtcagggttaccca
ggacccgggcaccctggcgccatgccaacactgtacatgccacctcttcatcgaccagag
gtcttcaaacaggccctgcacccaggactagtgggtcatctctctagctaa
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