KEGG   Silurus meridionalis (southern catfish): 124397951
Entry
124397951         CDS       T08004                                 
Symbol
ell2
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II elongation factor ELL2
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    124397951 (ell2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:smeo01009]
    124397951 (ell2)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smeo03021]
    124397951 (ell2)
Protein phosphatases and associated proteins [BR:smeo01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     124397951 (ell2)
Transcription machinery [BR:smeo03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     124397951 (ell2)
    Little elongation complex (LEC)
     124397951 (ell2)
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 124397951
NCBI-ProteinID: XP_046723816
LinkDB
Position
15:3573438..3593313
AA seq 623 aa
MAALSEDGRYGLNCGRNADRITVLHVKLTETAIRALENYQNCKNVPSSQPTIHFQGLQGR
IKIPKSDVSDGSHLFDFYLSNVGKDNPQGSFECIQQHVSGSGVPHLSSLGAIQDKITVCA
TNDSYQVTRERMTQAEEDTRKRGTKVIKPGGQFRGTKVQFRKPAPSAPDPVPERKRSTPM
NPANTIRKCLTNNPVSQRPYRERIIHLLALRSYKKLEVLGRLQRDGISQKDRNLLGSTLQ
QVANLNPKDNSYSLKDFIYREVQRDWPGYSEDERVQVDWILARKLGLPADSLSSSSSPKE
PTSPQKRQPQGDFIDPLMSKKPRISHLSSRGPQSSSDRRAPSETEEKRPAPPVNAACPGP
SSQPPVSHPPSGSNSNSPSTPEGRGTQDLPLDQSSTCGXETERYAPRSLTPSSNFIPSST
TSPAANSSKKPKKKSKKHKDKERERRGDTESTGHREAPAEKEERPRKRHRAEVEKHSPAI
VDSQLDAELHREDRTSKHKLTELPTPVIPDYIAKYTAVVSMDQRLRYKDDFNAEYDEYRT
LHARVENITRRFTQLDTQCRRLPPGTKEYQEVHEEVLQEYKKVKQHSPHYHEEKQRCEYL
HNKLAHIKRLIADFDQRRAQSWR
NT seq 1872 nt   +upstreamnt  +downstreamnt
atggccgctctctccgaggacgggagatatggactcaattgcggccgcaacgccgacagg
atcaccgttttgcacgtgaaactcacggagacggccatacgggctctggaaaactaccaa
aactgtaagaatgtaccgtcctcgcagccaacaatacatttccaaggactgcaagggcga
atcaagattccaaagtcagacgtctcggatggatctcatctcttcgatttctacctgtcc
aatgtcggcaaggacaatcctcagggaagctttgaatgcattcagcagcacgtgtccggc
tccggggtcccccacttgtcctctctgggggcgatccaggacaaaatcacagtgtgtgcc
accaacgactcctaccaggtgaccagagagcgcatgacgcaggccgaggaggacacgcgc
aagaggggcaccaaggtcatcaaacccggagggcaattcagaggtactaaggtgcaattc
cgaaagccagctccatctgcccccgacccggtccccgagaggaaaaggtcgacccccatg
aacccagccaacaccatccgcaagtgccttaccaacaacccagtgtcccagcggccatac
cgggagcgcatcattcacctgttggctctgcgttcctacaagaagctggaggtcttggga
aggctgcagcgagacgggatcagccaaaaggaccgcaacttgctgggaagcaccttacag
caggttgccaatctgaacccaaaggataactcgtactccttaaaggactttatttaccgt
gaggtccagagagactggcccggctactcggaggatgagcgtgttcaggtggactggatc
ttagctcgtaaactgggcctgcctgcagattcactgtcatccagcagttctccaaaagaa
cccacatcaccacagaagcgccagcctcagggtgactttattgaccctctgatgtccaag
aaaccccgcatctctcacctcagcagccggggtcctcagagctcgtcggatcgccgcgca
ccctccgaaaccgaggagaagagaccagctcctccggtgaacgcagcctgcccaggccct
tcgtcccagcctccagtgtcccaccctccctctggctcgaactccaactcgcccagcaca
cccgagggccgcggaacccaggaccttcccctggaccagagctccacatgtgggnaggag
accgagcgctacgctccccgctccctcacgccgagctccaacttcatcccatcatccacc
acatccccagcagccaacagtagcaaaaagcccaaaaagaagtcaaagaagcacaaagac
aaggagcgggagagaagaggggacaccgagagcacggggcacagggaggcaccggccgag
aaggaagagaggccaagaaagagacatcgtgcagaagtggaaaaacactcgccagctatc
gtggacagccaattagatgcagaactgcacagagaagacagaacaagcaaacacaagcta
accgaacttcccacgccggtgatacctgattacatagctaaatacaccgcggtagtgtct
atggatcagaggctgcgctacaaggacgacttcaacgcagagtacgatgaatatcgcacc
cttcacgctcgtgtggagaacatcacacggcgcttcacacagctggacactcagtgcaga
cgcctgccacccggaaccaaagagtaccaggaggtgcatgaagaggtgcttcaggaatac
aagaaggtcaaacaacacagcccgcattaccacgaagagaagcagcgctgcgagtacctg
cacaacaagctggcccacatcaagaggcttattgctgactttgaccagcggagggcgcag
tcctggcgttaa

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