Silurus meridionalis (southern catfish): 124397953
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Entry
124397953 CDS
T08004
Symbol
rin1a
Name
(RefSeq) ras and Rab interactor 2
KO
K17638
Ras and Rab interactor 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124397953 (rin1a)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
124397953 (rin1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
SH2_1
Motif
Other DBs
NCBI-GeneID:
124397953
NCBI-ProteinID:
XP_046723818
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All DBs
Position
15:19069902..19079435
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AA seq
818 aa
AA seq
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MQDDHVYDYPDAPPVGEKKICPQRGSLKSISVLDRLLLTYPVWLQMSINSATSLHILQRE
PPGTFLVRKSSTSQKKMLCLRLADDSVPSFVKQFIIREKDSTFSLESSAISFPDLCRLIA
FYCVSRDVLPFTLELPEAIAKASSQKQLESISHMGVEFWSSQLNFRGPRNGPPPVQDAPV
VQNSKPQQSITSTSTQETLFQEFCPIQTRSPSELDQGAGQGALCFINPLFLQEHPIRGAM
HKRHHFKRSIKVRVSTENTSSLSPPVTPAPPPPLFAKANCKGKKVQESEVVRTNEEDKRS
VEAVEEDSDYLQPPLLPKKKSAPVTITLSPTAEEEDYHSPKALLQAHRKIPVESEEENEE
EDIGLVLEKRKAPSLTELDSSSSISSLDEAEECPRRPSLTHGTSNPIIPSPYPPHQSVSA
LRKMSAAFVSFFVPGKRVIRLVEDLSQDRRMAFGALIQDFLKEQREALNLRCLTTTVEML
QGLRHFINQAKVFLLECGELEPPIETLVPEDEKDQTLEKALFRCVLKPLKGQIDAALYNV
HEHDGSMKRLTQSMARARDASPRELFGVQVAVPDAHGIEKIKHKMSLMRRAYSPIDKVIF
LLQICKLIYKAMKTNTGQEFGADDFLPALSYVIVQCNMPEFSLEVEYMMELLETSWLTGE
GGYYLTSVYASLSYIQSEPDAMPSSKLTHQVKESLKEWSLRRSTESKSQNDIKQRFVKVL
FQDGECSLVKTLQWKEGFSGEALAQLCANKFGVDKPDEFCLYWRSSGKLIQVPLDAQIQD
LQNLGTSSAPLIYQHSNQDMKSSKLTREGALDLSGEAS
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgaccacgtgtatgactatccagatgcccctccagtaggagagaagaagata
tgtcctcagcgaggctccttgaagagcatcagtgtgctggatcgcctgctgctcacatac
cccgtatggctgcagatgtctataaactcagccacgtcacttcacatcctacagcgtgaa
cccccagggacttttctggtgcgaaagtccagcacatcccagaagaaaatgctgtgtcta
aggctagcagatgacagcgtaccatcgtttgtcaaacagtttatcatccgggaaaaggat
tcaactttctctttggaaagctcagctataagtttcccagacctttgtagacttattgcc
ttctactgtgtgagccgggatgtgcttccatttactctggagttaccagaggccatagcc
aaggcttcatcccagaaacagttggaatccatttctcatatgggtgtggagttctggagt
tctcagttaaactttcgtgggcctcgcaacggtcctccaccagtacaggatgcgcctgta
gtccaaaattcgaaaccacaacagtctatcacatctactagcacccaagaaacactgttc
caggagttttgcccgattcaaacccgaagtccctctgaactggatcagggagcagggcag
ggagctttatgttttatcaacccactattcctacaagagcatcccattcgtggtgccatg
cacaagcgtcatcattttaaacgcagcataaaggttcgcgtctccaccgaaaacacaagt
tcgctttcaccccctgtcaccccggcaccacctccgccactattcgcgaaagccaactgt
aaaggaaagaaggtgcaggaaagtgaagtggttcggaccaatgaggaggataagagaagt
gttgaagctgttgaggaagattccgattatctacagcctcctcttcttccaaagaaaaag
tctgccccagtcacgataaccctctctccaacggccgaggaggaggactaccattcaccg
aaagctcttctgcaggcccatagaaaaatccctgtggagagtgaagaggaaaatgaggag
gaggacatcggactagtccttgagaaaagaaaagcaccatccctcaccgagttggacagc
agcagctccattagcagccttgacgaggccgaagagtgtcctcgcaggccttccctcaca
catggcactagtaaccctatcatcccctctccttatcctcctcaccagtctgtttcggct
ctgcgaaagatgagtgcagcgtttgtatcgttctttgtaccagggaagagagtcatacgg
ctggtcgaagacctttcgcaagacaggcgtatggcatttggtgctctgatacaagacttc
ttgaaagagcaaagggaagcactgaatctccggtgcctgacaaccacggtggagatgctg
cagggtttgcgtcactttatcaaccaggctaaggtgtttctgttggagtgtggagagctt
gagccaccaatcgagaccctcgtgcccgaggatgagaaagaccagacactggaaaaagcc
ctgttccgctgtgtactgaaacctctgaaagggcagattgacgccgcgctctataatgtg
cacgaacatgacggctctatgaagaggctgactcagagtatggcgagagccagagacgct
tcgccgcgagagctttttggagtgcaggttgctgtgcctgatgctcatggcattgagaag
ataaagcacaagatgtctctgatgagacgtgcctattcacccatcgacaaagtcattttt
ctactgcagatctgcaagctcatctataaagccatgaagaccaatacagggcaagaattt
ggagctgatgacttcctgccagctctttcctatgtgatcgtgcagtgcaacatgcccgag
ttttctctagaagtggagtatatgatggagctgctagaaacctcttggctgactggagag
ggtggatactatctgaccagtgtttacgccagccttagctatatacagagtgagccagat
gctatgccttccagtaaacttacccaccaagtcaaggaatccctgaaggagtggagcctc
cgtcgtagcacagagtccaagagccagaatgacataaaacagaggtttgtaaaggtgctg
ttccaagatggagagtgcagtctggtaaagactttgcaatggaaggaagggttcagcgga
gaagctttggcacaactctgcgccaacaaatttggagtggacaagccagacgagttttgc
ctgtactggagaagtagtggaaagttaatacaagttcctctagatgctcagattcaagac
ctgcagaacctgggtaccagcagtgctccactcatttaccagcactccaatcaggatatg
aaatctagcaagttgaccagagagggagcgttggacctttcaggggaagcctcgtaa
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