Silurus meridionalis (southern catfish): 124397981
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Entry
124397981 CDS
T08004
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124397981 (supt6h)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124397981 (supt6h)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
124397981 (supt6h)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
124397981 (supt6h)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
S1
HHH_3
S1_RRP5
HHH_9
SH2
Tex_N
MJ0788
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
124397981
NCBI-ProteinID:
XP_046723885
LinkDB
All DBs
Position
15:17351510..17366168
Genome browser
AA seq
1731 aa
AA seq
DB search
MQIFPTALVDMSDFIDSEAEESEEEFEEKDLKPKKTQRFMEDDDDEEEENTEDQDEHGNL
RGLIDDDNMEEEEEEENRSGGGDSDSGEEVRHRRRKRDYDDLLDDDDLDLIEENLGVKVK
RKKKYSRVRTMDDDGEDDEKDQIADEIFTRDGDGEGDEMGEGGEALHPGDDEEEEEGEES
DIDDFIVDDDGQPITKKKGKKFTGYTDAALQEAQEIFGGDFDFAEFDPEAYDHAEEEEED
QDDESWDRPKKQTKRRVGRRSIFELYEPSELESSHMTDQDNEIRSTDMPERFQLRSIPVK
PAEDDELEEEAEWIYRNAFSTPTISMQESTDYLDRGTTNFSRRGPSTIAKIKEALNFMRN
QHFEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLRTRKQNLTRLFQRMQSYQFEQI
SADPDKPLADAIRPLDTADMERLKDVQSMEELSDVYNHFLLYYGRDIPRMQNSAKVTKKK
LKKIKEVSEEDGEEAEIEEEEEEEEEQKGPDLKQASRRDMYSICQATGLDGLAKKFGLTP
EQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFSTPETVLEGTRYMVAMQIAREPLVR
HVLRQTFQERAKINIKPTKKGKKDVDEAHYAYSFKYLKNKAVKELNGDQFLKMCMAEDEG
LLSIDISIDLVGVKGYGGDQTYFDEIKQFYYRDEFSHQVQEWNKQRTLAIERSLQQFLYP
QMAKELKNKLVAEAKENIIKSCCRKLYNWLKVAPYRPDQQVEEDDDLMDDSQSKGIRVLG
VAFASGRDTPVFCALINGEGEVVDFLRLPYFLKRRNAWKEEEREKKLQDIENLKKFLLSK
KPHVVAVAGENRDAHMLIEDIKRTVSELEQDSSLPAVGVELVDNELATLYMNSRKSEADF
RDYPPLLRQAVSVARKIQDPLVEFAQVCSSDEDILCLKLHPLQEHVVKEELLSALYCEFI
NRVNEVGVDVNRAIAHPYMQSLVQYVCGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHM
GPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDA
NPAGALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRAPYRP
PNTEEVFNLLTKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQ
DNFPELSEVWNHFDSGSCPGQAIGVRSRLDNGVMGFIPTKFLSDKVVKHPEERVKVGMTV
HCRIMKIDIEKFNVDLTCRTSDLTDKNNEWKLPKDTYYDFDAETEDIKQDEEQKKKQQRT
TYIKRVIAHPSFHNINFKQAEKMMETMDQGDVVIRPSSKGENHLTVTWKVADGIYQHVDI
REEGKENAFSLGHTLWINNEEFEDLDEITARYVQPMAAFARDLLSHKYFQDCNGGERKKM
EEILIKVKKEKPTFIPYFVSACRDLPGKFLLGYQPRGKPRIEYVTITPDGFRYRSQIFPT
VNGLFRWFKDHYQEPVPGVTPSSSSRMRTPASVNATPANINFADLTRAVNSLPRNVTSQM
FNAIAAVTGQGQNPNTTPAQWASSQYGYSGGSSGGGGSSSAYHVFATPQQPIATPMMTPS
YSYTTPGQQQTMSTPQYPSSTPQSSHSHQHPSSTPSSSSSSSRVRTPQPKPTSHTAVDWG
KMAEQWLQEKEAERRKKASRMTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattttcccaacagccctcgtagacatgtcagacttcatcgacagcgaggcagag
gagtctgaggaggagtttgaggagaaagatctgaagcccaagaaaactcagagatttatg
gaagatgatgatgacgaagaagaagagaacacagaagatcaagatgaacatgggaacctg
agaggacttatcgatgatgacaatatggaggaggaagaggaggaggagaataggagtgga
ggaggggatagtgattctggagaggaggtccggcatcgtcgcaggaagcgtgattatgat
gaccttctggatgatgatgatctggaccttattgaagaaaacttgggggttaaagtgaag
aggaaaaagaagtactcgcgtgtgaggacgatggatgatgatggtgaagatgatgaaaaa
gaccagattgcagatgagatctttaccagggatggtgatggagaaggggacgaaatgggg
gaaggtggagaagcattgcacccaggggatgatgaagaggaagaagagggagaggaatca
gacatagatgatttcattgtggacgatgatggacagcccatcaccaaaaagaagggaaag
aagtttactggatatacagatgctgctttacaagaggcccaagaaatttttggtggtgac
tttgactttgctgagtttgaccctgaggcatatgatcatgctgaggaggaagaggaggat
caggatgatgaatcatgggaccgaccaaagaagcagacaaagcggagagtgggccgtcgc
agcatcttcgagctctatgagccaagcgagctggagagcagccacatgaccgatcaagac
aacgaaatacgttccacagatatgcctgagaggtttcagttgcgctctatacccgtgaag
cctgctgaggatgatgaactggaggaagaagctgaatggatatacagaaatgctttttcc
acacctactatatccatgcaggagagcacagattacctggaccgtggaaccactaacttt
agcaggagaggccccagtaccattgcgaagatcaaagaggccctcaactttatgaggaac
caacactttgaggttccctttattgctttctacaggaaggaatatgtggaaccagagctt
aacattaatgatctgtggaaggtgtggcagtgggatgagaagtggactcagctgaggact
cgtaagcagaacctaacccggctttttcagagaatgcagtcgtatcagtttgaacagatc
tctgctgaccctgataagccactggctgatgctattcgtccactggacactgctgacatg
gaaaggctaaaagacgtccagtctatggaagagctgagtgatgtgtacaaccactttttg
ctctattatggacgagatattcccagaatgcagaattcagccaaagtcaccaagaaaaaa
ctgaagaagatcaaggaagtgtcggaggaagatggcgaagaagctgagattgaagaggag
gaggaagaggaggaggagcagaaggggccagatctaaagcaagcctcccgtagagatatg
tacagcatctgccaggctacaggacttgatggactagccaaaaagtttggtcttactcct
gagcagtttggtgaaaacctgcgtgacagttaccagcgacacgagacagagcagttccct
gcagagccattggagcttgccaaggactatgtttgcagccagtttagcacaccagaaact
gttctcgaaggcacacgctacatggtcgctatgcaaattgctcgtgaacctctggtcaga
catgtattgagacagaccttccaggaaagggcaaagataaacatcaagcccactaagaag
ggcaagaaggatgtagatgaggcacactatgcatattccttcaagtacttgaagaacaag
gcagttaaagagctaaatggagaccagttcctgaagatgtgcatggcagaagatgaggga
ctcctctctatagacatcagcattgatttggttggagttaaaggttatggtggtgaccag
acatactttgatgagataaagcagttctactatagagatgagttcagccaccaggtgcag
gagtggaataaacagagaacacttgccatcgagcgttccctccagcagttcctttatcct
cagatggccaaggagctgaagaataaacttgttgctgaggccaaggaaaatatcatcaag
tcatgctgcaggaaactgtataactggctgaaggtggctccatatagaccagaccagcag
gtggaggaagatgatgatctgatggatgattctcaaagcaaaggcatccgtgtcttggga
gtggcctttgcttctggcagagacactcctgtgttctgtgctttgatcaatggtgaaggg
gaggttgtggacttcctcaggcttccttacttcttaaaaaggaggaatgcatggaaggaa
gaggaacgagagaaaaagcttcaagatattgaaaacctgaagaagtttcttcttagtaag
aaaccccatgttgtggctgttgctggtgaaaatcgtgatgctcacatgctgatagaggac
atcaaacgtaccgtcagtgagttggagcaagactcgtctttgcccgctgtgggagtcgag
ctggtcgacaacgagttagcaacactgtatatgaatagcagaaagtctgaggcggacttc
agggactaccctccacttcttcgccaggctgtgtcagtggctcgcaagattcaagaccca
ctggtggagtttgctcaagtgtgcagcagcgacgaggacatcctgtgccttaaactgcat
ccgctacaggagcatgttgtaaaggaggaactgctcagtgctctttactgtgaatttatc
aaccgtgtgaatgaagttggtgtagatgtgaacagggccattgctcatccttacatgcag
agcctggttcaatatgtctgtggcttaggaccaagaaaaggatcacatctacttaagatt
cttaaacaaaacaacactcgtttggaaaaccggactcagttggtcacaatgtgccatatg
ggccctaaagtgttcataaactgtgctggttttatcaaaattgacaccgcatccctcgga
gacagcaccgactcttacatcgaagttctagatggctctcgtgttcatcctgagacttac
gagtgggctcgtaaaatggcagtggatgccctggagtatgatgagtcagcagaagatgca
aatcctgcaggagccttggaggagattctggagaacccagaaaggctaaaggacctggac
ctggatgcatttgctgaggaattggagagacagggctatggcaacaagggcatcacactc
tatgatattcgtgctgaactcagctgtagatataaagacctgcgagccccttacagaccc
ccgaacacagaagaggtctttaacctgctcaccaaggagacccccgagaccttctatatc
gggaagcttattaccagtattgtaactggcatcgctcacagacggcctcaaggggaaagt
tatgaccaggctattcgtaatgatgagactggtctatggcagtgtcccttttgtcagcag
gacaattttcctgagctcagtgaggtctggaatcactttgacagtggctcctgtcctgga
caggctatcggtgtgagatcacgtctagataatggtgtcatgggttttattccaaccaaa
ttcctctcagacaaagttgttaagcacccagaggagagggtcaaggttggcatgactgtt
cactgtcgcatcatgaagattgacattgaaaagttcaacgtggaccttacctgtaggacg
tctgacctcactgacaagaacaacgagtggaaactacccaaggacacctactatgacttt
gatgccgaaaccgaggatataaagcaggatgaagaacagaagaagaagcaacaaaggacc
acttatatcaagcgtgtcattgctcacccatcgttccacaacattaacttcaagcaagca
gagaagatgatggagacaatggaccagggtgatgtggtgatcaggccaagcagtaaagga
gagaaccacctgactgtgacctggaaggtagcagatgggatctaccagcatgtggacata
cgggaggagggaaaggagaatgccttcagtctgggacatacactgtggatcaacaatgag
gagtttgaggatcttgatgaaatcacagcccgttacgtgcagcccatggcagcatttgct
cgggatctgctcagccacaagtacttccaagactgcaatgggggagagaggaagaaaatg
gaggagatcttaataaaagtaaagaaggaaaagcccactttcatcccttactttgtatca
gcctgccgagatctgcctgggaaattcctcttaggataccagcctagagggaagccaagg
atagagtacgtaaccatcactccagatgggttcaggtatcgctcgcaaatatttccaaca
gtgaatggactcttccgctggtttaaggaccactaccaggaacctgtgcctggagtaact
ccgagcagtagcagcagaatgcgcacaccagcatctgtgaatgcaactccagccaacatt
aactttgcagatttaactcgggctgtcaactctctgcccagaaatgtgacgtcacagatg
tttaatgctatagcagcagttacagggcagggccaaaatcctaacacaactccagcacaa
tgggcatcaagccagtatggttacagcggaggcagcagtggtggagggggcagcagcagt
gcttatcatgtgtttgcaacaccgcagcagccaatagcgacacctatgatgactcccagc
tactcgtacactaccccaggccaacagcagaccatgagcacaccacagtaccccagcagc
acaccgcagtcctcccacagtcaccaacacccttcgtccaccccttcgtcatcctcctcg
tcatccagggttaggacaccccagccaaaaccaacctctcacacagctgtagattggggt
aaaatggctgaacagtggctccaggaaaaagaagccgagagacgcaagaaggcatctcgc
atgacaccacggccatcaccaagccccatgatcgagagcacgccaatgtccatcgctgga
gacgcaactccactgctagatgagatggaccgatag
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integrated database retrieval system
