Silurus meridionalis (southern catfish): 124398004
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Entry
124398004 CDS
T08004
Symbol
ap3b1a
Name
(RefSeq) AP-3 complex subunit beta-1 isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
124398004 (ap3b1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124398004 (ap3b1a)
Membrane trafficking [BR:
smeo04131
]
Endosome - Lysosome transport
Others
AP-3 complex
124398004 (ap3b1a)
Endosome - Golgi transport
124398004 (ap3b1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
HEAT_2
INTS1_R4
SEEEED
Motif
Other DBs
NCBI-GeneID:
124398004
NCBI-ProteinID:
XP_046723919
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Position
15:complement(8424028..8481571)
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AA seq
1112 aa
AA seq
DB search
MDKMNSGLSGFYSEAQSFVHKVLVSAENLQLTLKSDPILEEHTLSCHPGGFLEAKNTGNE
DLKEMLESTKESHKLEAMKRVVGLIAKGKNASELFPAVVKNVASKNLELKKLVYVYLVRY
AEEQQDLALLSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDLSPY
VRKTAAHAIQKLYSLDPDQKEHLIEVIEKLLKDKSTLVAGSVVMAFEEVCPDRIDLIHKN
YRKLCNLLIDVEEWGQVVIINMLTRYARTQFMSPWREDATFDENNEQAFYDSDEEKKNGV
TQTKPYVMDPDHRLLLRNIKPLLQSRNTAVVMSVAQLYWHLAPKSELNIISKSLVRLLRS
HREVQFIVLQNIATMSIQKKGMFEPFLKSFYVRSTDATHIKTLKLEILTNLASEANISTI
LREFQTYVKSQDKEFAANTIQAIGRCATNISEITDACLNGLVVLLSSQNETVVAESVVVI
KKLLQTQPLQHSDIIKHMAKLFDSITVPMARASILWLIGEYCEHVPKISPDLLRKVAKTF
TNEQDIVKMQAVNLAAKLYLTNSKQTKLLVQYILNLGKYDQNYDIRDRTRFIRQLIVPNE
KSGALSKYARRILLAPKPAPVLQSAFKDRDRFQLGTLSHTLNSKATGYLELSDWPDVAPD
QSVRNVEVVETVNEWAPSVIKAKPVTSDDKFYSDPGEEEEDEEQESDSSSEGSSSSSSED
SSSNSESDENSESSSEAGESSSQSEKSSDLGSDKKKRKTQKNKELQQGTKLRKDSDSDVG
ENNTHTVKAGLRSESSSSEDTSSSSESDSDSDSPTKRTPINKPKPVKKSEKKPKRTKEIS
LLDLDDFSPSVVTTPKSSILSPSVLSDLQGLSLSASSTPAIQVTSPMFVPVRSYELIHSM
IGKGLAAHYHFPRQPCIYGNHMVSLQLTISNHSDHVLHNIHIMETVSTGKKIHSFSPVES
LELEASVTVSIGVDFNDSTQAASFQLCTKEDQFTVSIQPAVGELLLPVTMSEQDFNREQG
KLQGMNENSATVAMSSKNSSISDKIMNVANMGVVPSGENNMHRFAAKLVSSGTLVLVMVV
QKDASVQLTVNTEKTVIGSMLLHELQIAFGAP
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatgaacagtggtttgtctggattctactctgaagcacagagttttgtgcat
aaagttctggtttctgcagagaatttgcagctcactctgaaatcggaccccatcctcgag
gagcacactctcagctgccaccctggaggctttctggaggcaaaaaacactgggaacgag
gacctaaaggagatgctggagagcaccaaggaatctcacaaactggaggccatgaagagg
gtggtggggctgatagcaaaggggaaaaatgcatcagaactttttcctgctgttgtgaaa
aatgtggcaagcaagaaccttgagctgaagaagctggtttacgtgtacttggtcaggtat
gcagaggaacaacaggatcttgccctcctgtccatcagcacctttcagcgtgctctcaag
gatccaaaccagctaatcagggccagtgccctacgggttctctccagcattcgagtgcca
atcattgtgcccattatgatgttggccatcaaagaggctgcctctgacctttcaccctat
gtcaggaaaacagctgctcatgccatacagaaactgtacagtctggatcctgatcagaaa
gagcacctaattgaagtgattgagaagctactaaaagacaaaagcacgctggtggcagga
agtgtggtgatggcatttgaagaagtgtgtcccgatcggattgatctgatccataagaac
taccgaaagctgtgcaaccttctgattgatgtggaggaatggggacaggtggtgatcatc
aacatgctcacccgatacgcccgcacccagttcatgagcccatggagagaggatgctaca
tttgatgaaaacaatgaacaggcattctacgattcagatgaagagaagaagaatggagtg
acgcagacaaagccgtatgtgatggatccagatcacagattattgctgcgcaatatcaaa
cctttactacagagcagaaacactgctgtggtaatgtctgtggcacagctctattggcac
ttggcccccaaaagtgaattgaacatcatctccaaatctctggtgcgactgctaaggagc
cacagagaggttcaatttatagtgctgcaaaatattgccaccatgtccattcagaaaaag
ggcatgtttgagccgttcttgaaaagtttttatgtaagatcaacagatgctacacatatc
aaaacactcaagctggaaatcctaactaacttggccagtgaagccaatatctccaccata
ctacgagagttccagacctatgttaagagccaagacaaagagtttgcagccaatactatc
caggcaattggacgatgcgcaaccaacatctctgagattacagacgcatgtctcaacggc
cttgtggtattactttccagccaaaatgagacggttgtagcagagagtgtggtggtcata
aaaaagctgctgcagacgcagcccttacagcacagtgacatcatcaaacacatggctaag
ctgtttgacagcattacggttcccatggcaagggcaagcattttgtggctcattggtgaa
tattgtgagcatgtgccaaaaatctctcctgatctcctgaggaaggtggccaagaccttc
accaatgaacaggacattgttaaaatgcaagctgtcaaccttgcagccaaactgtatctc
accaactctaagcagactaagctgttggtacagtacattctaaacctggggaagtacgat
cagaattatgacatcagagatcgcactcggtttatccggcagctgatcgttcccaatgag
aaaagtggtgctctgagcaaatacgcaaggcgaattctgctggcgcccaaacctgccccg
gtgctgcagtctgcctttaaagatcgggatcgttttcagctcggcaccctctcccacact
ctgaactctaaagccacaggctatctggaactatctgattggccggatgtggctcctgac
caatctgtgagaaatgtggaggtggtggaaacggtgaatgagtgggctccgtctgtcatc
aaagccaaacctgtcacatcagatgacaagttctactcagacccaggagaggaagaagag
gatgaggagcaagaatcagatagcagcagtgaaggcagcagcagtagcagcagtgaagat
tcaagcagcaactcggagagtgatgaaaacagtgaaagtagcagtgaggctggcgagagc
tccagccagtcggaaaagagcagcgacttgggttctgacaagaaaaaacggaaaactcag
aaaaacaaagaacttcagcagggcacaaaactcagaaaagacagtgactcagatgtgggt
gagaacaacacgcatacggttaaagctggtttgagaagcgagtcaagcagttcagaggac
acttcgtctagctcagaatctgactctgattccgactccccaactaaacggacaccgata
aataaacctaaaccagtcaagaagtcggaaaagaaacccaagagaacaaaagagatttct
ctattggatttggatgacttttcacccagtgtagttaccacacccaagagctccatcctc
tccccaagtgttttgtctgacctgcaaggcctctcactgtctgcctcctccaccccagcc
attcaggtgaccagtcctatgtttgttcctgttcggtcttacgagctgatccacagcatg
attggaaaaggcctggctgctcactatcactttccccggcaaccgtgcatctatggcaac
cacatggtttctctccaactgacaattagcaaccacagtgaccatgtcttacacaacatc
cacatcatggagacagtgtccactggaaagaaaatccactcattcagcccagttgagagt
ttggagctggaggcatcagtaacagtttcaattggggtggattttaatgactcaacccag
gcagccagtttccagttgtgtactaaagaagatcaattcactgtatctatacagccagca
gtaggagaactactacttcctgtcaccatgtctgaacaggactttaaccgagagcaagga
aagctccagggaatgaatgaaaactcagccacagttgccatgtcatccaaaaacagctca
atcagtgacaagatcatgaatgtggctaacatgggtgtggtgccatctggagaaaataac
atgcacaggtttgcagccaagcttgtgagctctggcaccctggtgttggtgatggtggta
cagaaagatgccagtgttcaactcactgtcaacacagaaaagacagtcatcggctcaatg
ctgctccatgagctccagatagcatttggtgccccctag
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