Silurus meridionalis (southern catfish): 124398013 Help Entry 124398013         CDS       T08004                                  Symbol rad50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism smeo  Silurus meridionalis (southern catfish) Pathway smeo03440   Homologous recombination smeo03450   Non-homologous end-joining smeo04218   Cellular senescence Brite KEGG Orthology (KO) [BR:smeo00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     124398013 (rad50)    03450 Non-homologous end-joining     124398013 (rad50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     124398013 (rad50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:smeo03032]     124398013 (rad50)    03400 DNA repair and recombination proteins [BR:smeo03400]     124398013 (rad50) DNA replication proteins [BR:smeo03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     124398013 (rad50) DNA repair and recombination proteins [BR:smeo03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      124398013 (rad50)     BRCA1-C complex      124398013 (rad50)    NHEJ (non-homologous end-joining)     MRX complex      124398013 (rad50) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 Rad50_zn_hook AAA_21 SbcC_Walker_B SMC_N AAA_15 AAA_16 AAA_22 AAA_29 AAA_13 Intein_splicing Motif Other DBs NCBI-GeneID:  124398013 NCBI-ProteinID:  XP_046723929 LinkDB All DBs Position 15:complement(24481799..24500559) Genome browser AA seq 1313 aa AA seqDB search MSKIEKMSILGVRSFGVEDKDKQIISFFSPLTVLVGPNGAGKTTIIECLKYVTSGDFPPG SKGNTFVHDPKDAHETDVRAQIRLQFKDVNGEPVAVQRSMQSTQKGKKAPEFKTLEGVIT RIKHGEKVSLSSKCAEIDREMISALGVSKAVLNHVIFCHQEESNWPLSEGKALKQKFDEI FSATRYIKVLETLRQLRLKQSNTIKSCQMELRYLKQNKEKAQEIKELLSTKEAQLVASKE SVQRIENQIDPMENRLNDIDDNLGKVMKLDNDIKALDSRRKQMEDDSRELEEKMEQVFQG SDGQLQEMYENHQLTVKKKEKRLTECQRDLERAVRECQRMNYMKSDLLVEQGRLQMEADK QALHIKNRDAQVKSLASYLEMEGYDRAPFNERQLQSFHKQVRERQDQESEALNRVMIDLQ EKETQKQQNIDEIRDKKTGLERTIELKKNIQAKKQQELKNIKSDQQRLEGSSSRLQELEI DLTKAEQELEKAVQDSTVDSLKMEVQELQREKMELDQAQRKLDQEMETLNIHTTARTQMD MLRKDKTDKEDQVRRIKSRHNEDLVSLLGHFPNKRELEGWIHSKSKEINSIREKLSKLNK ELASREQNKSHCTAEIRRKEQQLANYEEKFFNVCGSQDFESDLSKLQDDLEKCSKQRAML AGATAVYTQFISQLTEEGEPCCPVCQRVFPSEAELQDVINDMQSKLRLVPDKLKNTEQDL KRKERKRDDMMALKPIRQSIAELHEKDLPELKNKLQSVNREIEQLKREIEEQESLLSLLM SEEDTAKACLQDISLMDRYQLDLKDVERKIAQHTAKLQGVDMNRTMQHISQEKQEVQHRL DTTCSKMELKRKLIQDQQEQIQVLKSNVNEVCAEKLQVSSNMQKQQQLEQQSVESAAEIQ ELHREIRDAEEQVSPLAITLEKLQHEKQDLIARRKEKQCEGQEKINAIRERVKNLAFLER EITKYTEEGKDDYKQQKEAELQEINTQLTEAEKQREKINKDIGNFRQDIDTQKVQERWLQ DNLTLRKRMEELKEVTRRREVLLREMGNMQVMELRNERRELERKVEDLKKNRSVALGRQK GFEEEILRFRKELREDQYCQAEERFRDKMIIMRTTELANKDLDIYYKALDQTIMKFHSMK MEEINKIIRDLWRSTYRGQDIEYVEIRSDVDENASAGTKRRTYNYRVVMVKGDTALDMRG RCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQ RNFQLLIITHDEDFVELLGRSNYVEHFYRIKKNQDLCSEISKCSITTLNSYLR NT seq 3942 nt NT seq  +upstreamnt  +downstreamnt atgtcaaaaattgagaagatgagcattcttggagtgaggagttttggagttgaggacaag gacaagcagatcatttcattctttagtcctctgacagtgctggttggtccaaatggagcc ggaaaaacgactattattgagtgtcttaaatacgtcacctcgggagattttcctcctgga agtaaaggaaatacttttgttcatgacccaaaggatgcacatgagacagatgtacgtgct cagattcggctgcagttcaaagatgttaatggagaaccggtagctgttcagcgttccatg caaagcacacagaaaggcaaaaaagcacctgagtttaaaacgcttgaaggagtcatcacc agaataaagcatggagaaaaagttagtctgagctccaagtgtgctgagatagaccgtgag atgatctcagctctgggtgtttcgaaagcagttctcaaccatgtcatcttctgccaccaa gaggagtctaactggcctctcagtgaaggaaaagccctcaaacagaaatttgatgagatt ttctcagcaacaaggtacatcaaggtcttggaaacccttcgtcagttaaggctgaagcag tccaacaccattaaatcctgtcagatggagttgagatatctgaagcagaataaggaaaag gcgcaggagatcaaggaacttctgtccactaaagaagcccagctagtagcttctaaagaa agtgtacagcgcattgagaaccagattgatcccatggagaatcgtttgaatgacattgat gacaatctgggcaaagtcatgaaactggataatgatattaaggctctggacagcaggaga aaacaaatggaagatgacagtcgtgaattagaggagaagatggagcaggtgtttcagggt tcagatgggcagttgcaggagatgtatgagaatcatcagctcacagtgaagaagaaagag aagagactcacagaatgtcagcgtgatctggaaagggccgttcgtgagtgccagaggatg aattacatgaaatcagacctactcgtagaacagggtcgtcttcagatggaagcagacaaa caggccttgcatataaagaaccgagatgctcaggtgaagtctttagcttcctatttggaa atggaaggatatgacagagctcctttcaatgagagacaactccagagcttccataaacaa gtcagggagagacaagaccaggagtccgaagcccttaacagggttatgattgacctgcaa gagaaagaaacacagaaacagcaaaacattgatgagattcgtgataagaagacaggcttg gagaggaccatcgagttgaagaagaacatacaggccaagaagcagcaagagttaaagaac atcaagtctgaccaacagagattagaaggttcctcatctagacttcaggaactggagatt gatctcacaaaagcagaacaagagctggagaaggcagtacaggattccactgtggatagt ctgaagatggaggtgcaggagctacagagggaaaagatggaattggaccaggctcagcgc aaacttgaccaagaaatggaaactctcaatattcacaccacagcacgcacacaaatggac atgctgaggaaagataaaactgataaagaagatcaggtaagaaggatcaagtccaggcac aatgaagacttggtttctcttctgggccactttcctaacaaaagggagcttgaaggctgg attcatagcaaatcgaaagagatcaactcgatcagagagaagctgagcaagctcaataag gaactggcatccagagagcaaaacaagagtcactgtacagctgagattcgacgcaaagag cagcagctggccaactacgaggagaaattcttcaatgtgtgcgggagtcaggactttgaa tctgatctgagcaaattgcaagatgacctggagaagtgttccaagcagcgagcgatgctg gcaggggccacggccgtgtacacgcagttcatcagccagctgacggaggagggagagccg tgctgcccagtgtgtcagcgtgtcttcccctcagaggctgagctccaggacgtcattaat gacatgcagtccaaactgcgcctggtgccagacaagctgaaaaacaccgagcaggatctg aagagaaaggagcgcaagcgtgatgacatgatggcccttaaacctatcagacagtctatt gcagagctgcatgagaaggatctaccagagttaaagaataaactacagagtgtgaacaga gaaatagagcaattaaagagagagattgaggagcaggagagtctgctgtctctgttgatg tctgaggaggacacggctaaagcctgcctacaggacatttccctcatggaccgttatcag ctggatctgaaggatgtggagaggaagatagcacaacacactgccaagcttcagggagtg gacatgaaccgaacaatgcagcacatcagccaggagaagcaggaggtccaacatcgcctt gacaccacctgcagtaagatggagctgaaacgcaaactcatccaggatcagcaggagcag attcaggtcctaaagagtaatgtgaatgaggtctgtgctgaaaagcttcaggtttccagt aacatgcagaagcagcagcagctggaacagcagagtgtggagtctgctgctgaaattcag gagctgcaccgagaaatacgtgatgctgaggagcaggtctctccactggccatcacgtta gagaagctccagcatgaaaagcaggatctgattgcacgcagaaaggaaaagcaatgtgaa ggccaggagaagattaatgccatcagagagagagtgaaaaatttggcctttttagagaga gaaattaccaagtacacagaagagggaaaagacgactacaagcagcaaaaagaagcagaa cttcaggagataaatactcagctgactgaagcggagaaacaacgtgaaaaaatcaacaaa gacattggaaatttccggcaggatatcgacactcaaaaggtccaggagcgctggcttcag gataatctgactctgagaaagcgtatggaggagctgaaggaggtcaccaggagaagagag gtcttactgagggagatgggcaacatgcaggtcatggagctacgcaatgagcggcgagag ttggagcggaaggtggaggacctgaagaagaatcgaagtgtggccttgggacgacagaag ggttttgaggaagagatcctgcgctttcgtaaggaacttcgtgaagatcagtactgtcag gctgaggaaagattccgggacaagatgatcattatgaggaccactgaactggctaacaag gatctggacatctattataaagcattggaccaaacaatcatgaagtttcacagtatgaag atggaagagatcaacaaaatcattcgagacctgtggaggagcacgtatcgtggacaagat attgaatatgtagagatccgctctgatgtggatgaaaatgcctcagctggtacaaaaaga cgaacctacaactatcgagtggtcatggtcaaaggagacaccgctttagacatgcgagga cgctgcagtgctggacagaaggttttggcctcactcatcatccggttggctttagcagag accttctgtctgaactgtggaatccttgcactagatgaacccactactaatttggacaga gagaacattgagtctttagcccacgccttggtggaaatcatcaagagtcgctctcgtcag cgtaactttcagctgctcatcatcacccacgatgaggattttgtggagctcctgggtcgc tccaactacgtagagcacttctacaggatcaagaagaaccaagacctgtgctctgagatc tcaaagtgcagcatcacaactctaaacagctacctgcgctaa

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