Silurus meridionalis (southern catfish): 124398064
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Entry
124398064 CDS
T08004
Symbol
otpa
Name
(RefSeq) orthopedia homeobox a isoform X1
KO
K24901
homeobox protein orthopedia
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124398064 (otpa)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
124398064 (otpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124398064
NCBI-ProteinID:
XP_046724032
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All DBs
Position
15:complement(8358884..8364215)
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AA seq
337 aa
AA seq
DB search
MIGGDHSIFGAGEKQEFDLVACMGACVYLAGMKDAAVELLGHREALKCRLGVGVGVSEPG
HTGELRPSTETLEGATHLPGDELGNVGSNPPNGKEQDKQQQQQQNQNSAQAVSQQTQKQK
RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKT
TNVFRAPGTLLPTHHGLPQFPSAAINDSLCSFHANDTRWAAAGMPSVSQLQLPPALGRQP
GMAQSLSQCSLGGAGPAGPGSMGLSNMASNGSALQSHHLYQPTFPGMVPASLAGPTSASA
STQLCNSSSTDSDVWRGTSIASLRRKALEHTVSMSFT
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgattggaggagatcattctatcttcggagcaggcgagaaacaggagtttgacctggtt
gcatgtatgggggcatgtgtgtatcttgcagggatgaaggatgctgcggtggagctcctg
ggacacagagaggcactaaagtgcagactgggggtcggtgtcggggtgtctgagcccgga
cataccggagaactacgcccgagtacagaaaccctggaaggcgcgactcatcttcccggg
gacgagctcggcaacgttggatccaatcctccgaacggcaaagagcaagacaagcagcag
cagcagcaacaaaaccaaaactcagcgcaggccgtaagtcaacaaacgcagaaacagaaa
cgccaccggacccgctttacgcctgcgcaactcaacgagctggaacgcagttttgctaaa
acgcactatccggacatcttcatgagagaggagctcgcgctacgcatcggtttgacggaa
tcgcgcgtgcaggtttggttccagaatcgacgtgccaagtggaagaagcgcaagaagacc
acaaacgtgttccgcgcgccaggcaccttactcccgactcatcacggtttaccgcagttt
ccttctgcggctattaacgacagcctatgctcgtttcacgcaaacgacacgcgctgggct
gcggccgggatgcccagtgtctctcagctacagcttccccctgcgctcggacgtcagcct
ggcatggcgcagtctctgtcgcagtgcagcctgggaggcgcgggcccggcgggtcctggc
tccatgggtctgtctaacatggcgtctaacggctcggccctgcagtcgcatcatctatac
cagcccacgttcccaggcatggtgcccgcgtcactcgcgggcccgacaagcgccagtgcc
tccacgcaactgtgcaactcgtcatcgacagatagtgacgtgtggcgcggcacgagcatc
gcgtcactgcgtcgcaaagcgctcgagcacacagtctccatgagtttcacttaa
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