KEGG   Silurus meridionalis (southern catfish): 124398079
Entry
124398079         CDS       T08004                                 
Symbol
pafah1b1b
Name
(RefSeq) lissencephaly-1 homolog B
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo00565  Ether lipid metabolism
smeo01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    124398079 (pafah1b1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:smeo03036]
    124398079 (pafah1b1b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smeo04147]
    124398079 (pafah1b1b)
Chromosome and associated proteins [BR:smeo03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    124398079 (pafah1b1b)
Exosome [BR:smeo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124398079 (pafah1b1b)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 Nup160 LisH eIF2A Pox_A_type_inc Nucleoporin_N LisH_2 ARMC9_LisH DUF2570 DUF6813
Other DBs
NCBI-GeneID: 124398079
NCBI-ProteinID: XP_046724052
LinkDB
Position
15:21855384..21869914
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPMGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDHAGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLLASCSNDQTVRVWVTATKECKAELREHEHVVECISWAPESAHSTILEATGSE
NKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHPGGRFIVSCADDK
TLRTWDYKNKRCMKTLSAHEHFVTSMDFHKTSPYMVTGSVDQIVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacagaggcaacgagatgagctaaatcgagcgatagcagattacctccga
tcaaatggctacgaagaagcgtattccgtttttaagaaggaagcagagttagatatgaat
gaagaattagataagaagtatgcaggccttttggaaaagaaatggacctcagtcatcaga
ttacaaaagaaggtaatggagctggagtcaaagcttaacgaagcaaaagaggagatcact
ttaggagggcccatggggcagaagagggacccgaaagagtggatcccgcgaccccctgag
aagtacgcgctcagcgggcacaggagtcccgttacacgtgttatctttcaccctgtcttc
agcgtcatggtttctgcctcagaagacgccacaattaaggtgtgggactatgaagcagga
gacttcgagagaactctgaagggtcatacagactcggtgcaggacatttcctttgaccac
gctggaaagttgctggcctcttgctcagcagacatgaccatcaaactctgggacttccag
ggctttgagtgcatcaggaccatgcacggacacgaccataatgtgtcatcagtagccatc
atgcccaacggtgatcatattgtttctgcatcaagggataaaaccattaagatgtgggag
gtggcaactggttactgcgtgaagacgtttacgggccatcgggaatgggtgaggatggtg
cgacccaaccaggatggcacgctgttggccagctgctcaaacgaccagacggttcgagtg
tgggtcactgccaccaaggagtgcaaagctgagctgcgggagcatgagcatgtcgtggag
tgtatctcctgggctccagagagtgcccattctactatactggaggccactggctctgag
aacaaaaagagcggtaagcccgggcccttcttgctgtctgggtctcgagacaaaaccatt
aagatgtgggatgtcagtactggcatgtgccttatgacactggtgggccacgacaactgg
gtgcgtggtgtgctgttccacccaggtgggaggtttattgtaagctgtgccgatgacaag
accctgcgcacttgggactataagaacaagcgctgcatgaagaccttgagtgcccacgaa
cacttcgttacctctatggatttccacaagacctccccctacatggtgactggaagcgta
gatcaaatagttaaagtgtgggaatgccgctga

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