Silurus meridionalis (southern catfish): 124398151
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Entry
124398151 CDS
T08004
Symbol
dna2
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease DNA2
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124398151 (dna2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smeo03032
]
124398151 (dna2)
Enzymes [BR:
smeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
124398151 (dna2)
DNA replication proteins [BR:
smeo03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
124398151 (dna2)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
124398151 (dna2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
Dna2_Rift
AAA_11
AAA_30
AAA_19
PDDEXK_1
nSTAND3
SRP54
DEAD
ResIII
bpMoxR
UvrD-helicase
Intu_longin_2
AAA_22
PIF1
AAA_25
MobB
Helicase_RecD
CbiA
SLFN-g3_helicase
AAA
AAA_18
AAA_7
YqeC
Motif
Other DBs
NCBI-GeneID:
124398151
NCBI-ProteinID:
XP_046724164
LinkDB
All DBs
Position
2:11847818..11871574
Genome browser
AA seq
1327 aa
AA seq
DB search
MQTCDRQDTRFPLSPLTIPETPESEKKHHCPKQPFSVGPCSPVSRSPHSRGLSCKTKLLS
SRLLQPQNETSPKSGDTFEAENCIGQFGSVKRLIHGLESQPKAKRPRTGQVLKSVEQESL
SEGDEISKFLLNIHESANLKDKTLMKGFSKNIEKKLDKAVKTLSVKNCLITTVPGKILGN
MTSEKKNGAPGSVTNLPPISHRKISSSEDEKENTPLSTEPSTDYTEISNDNQSDLVVSYT
SWVCNNDGEKEKSKQVNNLDDKEKAITTAEENLNILDDSWFNDQMEQSFQEPEHKKSKIE
KKDSIPEHVILSSGLHNRYWVLDVQEATGAQGYIEKHLTITCSKSSHPTETCVLKDGWEN
TPVAVGDIVHLEGECVSGYWVIDRNSGYLVLLPDVLISGTSVANSVRCMRRAVLGEMFKS
LDGGSKQMLNGTIVHDIFQKAAMSLDFSAGNLEKFASEALLNPNYLGQMYSLKLTQADMK
QEVDEYLPAIAEWAKDYLHTSAQARQKQLTFRLPSDGALSRQDSACSITVTDFVDIEENI
WSPRFGLKGKVDVTAGVRIHRRGRRHVDKIVPLELKTGKESNSIEHRSQVILYTLMSTER
RTDAEAGFLVYLKTGNLHPIVGNHMDRRELIKLRNSLVQHLSNSLIKKEGKSRMACLPEV
ISDQQACKYCPQRRNCALYSRAVEKASVACPSEDPQAFLQHESEHLNQLHLQYFSHWLLL
CSLEALTIESKRGRRNIWLQSAQEREKNGGCVGNMILEGRVTALSDSVYVHHFKRRQGAH
ALITLIVGDRVVISDQDSRFIAIASGYVNEITSTGVTCYLDKNLSKNSSDMIFRLDHDEG
AGGLSTHLGNLCMLMENSPNSERLRQLIVEFKPPQFIYSLSSVLPREAKDAVANILKGLN
KPQKQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVRILHACGFSVLLTSYTHSAVDNILL
KLKKFKVSFLRLGRAQKVHRDIMPFTEEQNRSRGINTLEQLEDLYNKELVVATTCMGVKH
PIFSRRRFDFCIVDEASQISQPVCLGPLFYAHRFVLVGDHQQLPPIVQNAEARALGMDES
LFKRLEHHSQAVVQLNVQYRMNSMIMSLSNALMYEGRLECGSERTANAQLQLPSRAITEN
ELCMCQPQYTVWVHAALEPQKSVCFLDTSQVPALETVEKGGVSNGTEAILVHTLICLLLK
AGCRASDIGVIAPYRQQLKAISSLLEEDSFRAVEVNTVDKYQGRDKSIIIVSFVRSHTEG
NLGELLKDWRRLNVAITRAKHKLLMLGSAPTLRLYAPLEKLLTHMQQENMVYQLPPAAHE
ALPRFKI
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgcagacctgtgataggcaggacacaaggtttcctctctcacccctcaccatccctgag
acccctgaaagtgaaaaaaagcatcactgcccaaaacagcccttttctgtgggtccgtgc
tcccctgtgtcccgtagtccacattcccgaggcctttcctgcaagaccaaactcttgtct
agcagattactgcagccacagaatgaaacaagcccaaaatcaggggatacttttgaagca
gagaattgtattggtcagtttggttcagtgaagcggctgattcatggtttggagtcgcag
ccgaaagccaagcgccccagaacagggcaagtactgaaaagtgttgaacaagaatcgctc
tctgagggagatgaaataagcaagtttcttctgaatattcatgaatctgcaaatttgaaa
gataagacattaatgaaaggcttctcaaaaaacattgagaaaaagttggacaaagctgtc
aagacactatctgtaaagaactgtttaataacaactgtacctggtaagattctgggaaat
atgacttcagagaaaaagaatggtgcccctggatcagtcacaaatttaccaccaatcagc
catcgtaaaatcagctccagtgaagatgaaaaagagaacacccctcttagtactgagcca
agcacagactacactgaaatatccaatgataatcagtcagatcttgtggtgtcttacact
tcatgggtgtgcaacaatgatggtgaaaaggagaaatcgaaacaagttaacaaccttgat
gataaagaaaaagccatcacaactgctgaagagaacctcaatatcctggatgacagctgg
tttaatgaccaaatggagcaaagtttccaagagccagagcataaaaaatccaagattgaa
aagaaagacagcattcctgagcatgtcattctttcttctggactccataaccggtactgg
gttcttgatgtgcaagaagccactggagcccaaggctacattgaaaagcatttaaccatc
acttgttccaaatcatcacaccctacagagacctgcgttctaaaggatggctgggagaat
actccagttgctgttggggacattgttcatctggaaggggagtgtgtttctggctattgg
gtgattgataggaactctggttatctagtgcttctgcctgatgtgctcatctccgggacc
agcgtagctaacagtgtccgctgtatgagacgtgctgtacttggagagatgtttaagagt
ttggacggtggaagcaagcagatgctgaatgggactatagttcatgatatctttcaaaaa
gctgcaatgtctttagacttttctgctggaaatctagagaagtttgccagtgaagccctg
ctcaacccaaactacctcggacaaatgtatagtctaaaactgactcaagcagatatgaag
caggaggtggatgaataccttccagcaattgctgaatgggccaaagactatctccatacc
tctgcacaagccaggcagaaacaactgactttcaggctccccagtgatggagctttaagc
aggcaggactcagcctgcagcatcacggtcactgattttgtggacattgaagaaaacatc
tggtctccaaggtttggactgaagggaaaagttgatgtgacagccggggtacggatccac
cggcgtggcaggaggcatgtagacaaaattgtgccactggagctaaagaccggaaaggaa
tctaactccattgaacatcgtagccaggttatcttatatactcttatgagcactgagaga
cggacagatgctgaggctggctttcttgtttatttaaagactggcaatctacaccctata
gtgggcaaccacatggacagaagagagctgatcaaactgaggaactctctggttcaacat
cttagtaacagtctcatcaagaaggagggcaaaagccgaatggcatgtttacctgaagtc
atctctgaccagcaagcctgcaagtattgcccacagagaagaaattgtgcactttatagc
agagctgtggagaaggcttcggttgcatgtccttctgaagatcctcaggctttcttacag
catgagagtgaacatctaaatcagcttcacctacagtacttcagtcactggttgttgctc
tgcagcttggaagcactaaccatcgagagcaagagaggacgtcgtaacatctggctccag
tctgctcaggagagggagaagaatggtggctgtgttgggaacatgatattggaaggcagg
gtgactgctctgtcagacagtgtgtatgtgcaccactttaagcggaggcaaggagcacat
gcactcatcacactgattgttggggacagggtggtgatcagtgaccaggactccaggttc
attgctatagccagtggatacgtcaatgagatcacaagcacaggagtgacgtgctatttg
gataaaaatctttcaaaaaattcctcggatatgatattccgtctggatcatgatgagggc
gctggaggcttgagcactcatcttggaaacctctgtatgctgatggagaactccccaaac
agtgaaagactaaggcagctcattgtggagtttaagcctcctcagttcatttacagcctc
agcagtgtgttgcccagagaggccaaagatgctgttgccaacatcttgaaagggctcaac
aaacctcaaaaacaggccatgaaaaaggtactactttccaaagactacacacttattgtt
ggaatgcctggaactgggaaaactactaccatttgtacactggtgcgtattctgcacgcc
tgtggcttcagtgtactattgaccagctacacacattctgctgtagacaacattttgctg
aagctgaagaagtttaaggtcagcttccttcgcctgggtagagcacagaaagtgcaccgt
gacatcatgcccttcaccgaggagcagaatcggtccaggggaatcaacacccttgaacag
ctagaggatctctataataaagagcttgttgtagccactacttgtatgggtgtgaagcac
ccaatcttcagcagacggcgatttgatttctgtattgtggatgaggcgtctcagatcagc
cagcccgtgtgcttgggaccgctcttctatgctcatcgttttgttcttgttggagatcac
caacagctgcctccaattgtccaaaatgctgaggccagggctttagggatggatgagagc
ttattcaaacgtctcgagcaccacagtcaggctgtagttcagctaaatgtccagtacagg
atgaacagcatgattatgtcccttagcaatgccctgatgtatgagggcagactggagtgt
ggctcagagcggactgccaatgctcagctacagcttccctctagggccataacagagaac
gagctgtgcatgtgtcagcctcagtatactgtctgggtccatgctgccctcgagcctcaa
aaatctgtctgctttctggacacttcacaggttccagctttagagactgtagagaaaggt
ggagtcagtaatggcacagaggccatcttggtgcatactcttatttgcctgctgcttaag
gccggctgcagggcaagcgacattggtgtcatcgctccataccggcagcagctcaaagca
atttccagtctgctagaagaagactcattcagagctgtggaggtgaacacggtcgacaag
tatcagggccgggacaagagcatcatcattgtgtcctttgttaggagccacacagagggc
aatctgggagagctgctgaaagactggcgaaggctgaatgtggccatcaccagagccaaa
cataagctgctgatgctgggctcagctcctacactacgtctttacgctccactggagaaa
cttctcactcacatgcagcaggagaacatggtctaccagctgccacctgctgctcatgag
gcactacctcgtttcaagatctga
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