Silurus meridionalis (southern catfish): 124398152
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Entry
124398152 CDS
T08004
Symbol
nkx6.1
Name
(RefSeq) homeobox protein Nkx-6.1
KO
K08030
homeobox protein Nkx-6.1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124398152 (nkx6.1)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
124398152 (nkx6.1)
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
PKK
ABC_trans_N
Motif
Other DBs
NCBI-GeneID:
124398152
NCBI-ProteinID:
XP_046724161
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Position
15:complement(13032057..13035790)
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AA seq
318 aa
AA seq
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MLAVGQMDGPRQGAFLLNTSPLSALHSMTEMKTPLYPAYPLPSTGPASSTSPTSTSPNPG
GVPVSSPGIKTSTAVLSALGSQQCGASATPHGINDILGRPSVFSTGATSSPAGLLSGLPR
FSSLSPPPPPGLYFSPSAAAVAVARYPKPLAELPGRTPIFWPGVVQSPHWRDARFACSPH
QNSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF
QNRRTKWRKRHAAEMASAKKKQDSETERLKGASENEDDDDDYNKPLDPNSDDEKITQLLK
KHKPTPGLIMHAGDTDSS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgttagctgtggggcaaatggacggacctcgtcagggcgctttcctgctgaacacttcg
cctttatctgctctgcacagcatgaccgaaatgaagacacctctgtacccggcttacccc
ttaccatctaccggcccggcctcgtctacttcccctacctcgacctctcccaacccaggc
ggggtcccggtgtcatccccggggatcaaaacatcaacggctgtactctcggctctggga
tcgcagcagtgcggggcctcagccaccccacatggcataaacgacatcctcggtcggccg
tcggtgttttctactggagcaacgtcctctccagccggtctgctctctggtctgcctcgt
ttcagtagtctgagtccacctcctcctccggggctttacttcagcccgagcgcagctgct
gtggccgttgcccggtaccccaaacctctggcagagctgcccggcaggactcctatattc
tggccgggagtggtgcaaagcccacactggagagatgccagatttgcgtgttcgcctcat
caaaactcggtgctgctggataaggacggaaaaaggaagcacacaagaccaacgttttcc
ggtcagcaaattttcgcgctggaaaagacttttgaacagaccaagtatttagcgggaccg
gagagagcgcgcctggcatactccctgggcatgacagagagccaagtgaaggtatggttt
caaaaccggagaacgaagtggcggaagaggcacgcggctgaaatggcatcagccaagaaa
aaacaagactcagagaccgagcggctgaaaggagcgtcggaaaacgaagacgacgacgac
gattacaacaagcctttagatcccaactcggacgacgaaaaaatcacgcagctgctgaaa
aaacacaaaccgacccccgggctcataatgcacgcaggagacaccgacagctcgtaa
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