Silurus meridionalis (southern catfish): 124398222
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Entry
124398222 CDS
T08004
Symbol
c6
Name
(RefSeq) complement component C6
KO
K03995
complement component 6
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
124398222 (c6)
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Gene cluster
GFIT
Motif
Pfam:
MACPF
Kazal_C6
Sushi
TSP1_spondin
Ldl_recept_a
TSP_1
EGF_C8A_B_C6
Kazal_C7
Kazal_3
Motif
Other DBs
NCBI-GeneID:
124398222
NCBI-ProteinID:
XP_046724263
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Position
15:11649020..11670813
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AA seq
1189 aa
AA seq
DB search
MCSAPNGRKSRPGSAGRMFQLGKAARSEPERRESTDSARRGGHRAVEHCRAAVQEFNTLV
ALHREQVISIGEITADCPTLRARMHSTRIKGCTVAQSAYQHLTLISGPEDGEIHPEICRL
FIQLQCCLEMYITEMLKSLCLLGVLQLHRKGNEPCPESNADCRVDESSDVPILEDRSSSP
IDFPHESWLVCTDIENIESDMREMRNLLSKLRETMPLPLKNQDDSSLLNLTPYPLVRQRK
RRFSGLCCLVSGCKKICALMGHIRFLLTFLLILASVTAIFGCYCDHYSWTSWSICTKTCE
QGTQERTRNVQYDDYWNKHNCARLCQIHERRTCNVDPCPINCELTSFGPWSECSPCAKKI
FRTRYVQRPAQFGGQDCNEPLMEELPCHPSKECAIEKLNCKDKFTCDNGRCIKANLECNG
QNDCLDNSDEKNCGKINYVCPEQRNFYVIPGVDLIGNGFDVIAEKKRAAVLDNSFLGDEC
VLNRSRENRKIYRIPANIEIYNIKVEQLEDIKESPPVQANEITLSSQRSYTGDTLMDSGW
GVPILLGSFQRSHKGNSFKEELKAFQKKDSEYIHLHQVIATATFKTKSTDLYLSYPFLTF
LNNLPLDYNYALYRQIFEIYGTHYFSSGTMGGQYDLLFQYDREQLKSEGCSTAQSSKNIK
NEFSVFLLLYFTHSHSQTHGTTTETIKYEGSFMQKSEKSISSVRGGRAEYAAALSWEQKG
SPPDSTTYKDWVASTIDNPGVIDYELKPMLDLVRGIPCAVTKRRHMRRAMAEYMQSFDSC
KCAPCPNNGRPTLSGTECVCICQTGTFGDNCIKRAKDYTSVAVDGYWTCWSSWSVCDASL
TRSRTRSCSNPTPQNGGKPCQGPARQQDECKISIFQEKDVCINDDDFTYEGDSESVLPSG
ATGCAKPRPPANSHLRFNKRVYDYGDPEEFVCFTGYELKGYQIIRCRQDGKWEKAKGSCI
KRVCSRPNLPNDVKISPIKEEYSIGSSFSLSCSGRAMSLSGPRYYTCTEALTWDPSIPAD
IHCESDEVFTQDSSCPLGQHRMGSTCVCIPREDCRKYKDDVCALDVTKGSAAMMSICSFH
ANRCHGDKLQFINDGPCKGNVNWAVFRASLSQKSSVQEPCGLDTCYEWEICTGLDICHCK
IPRDCSTTEGKAYCVTILKPFRQQTMNLCKLATMKCSGIQLEIHHEGEC
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtgttccgcaccgaacgggcgaaagagccgccccggatccgcaggccgcatgtttcag
ctgggcaaagcggcgcgcagcgaacccgagcggcgagagagcacggacagcgcccgcagg
ggaggacaccgcgctgtggagcactgcagagcggcggtacaggagtttaacactctggtg
gcactccaccgtgagcaggtcatctccataggagagatcacggctgattgtccaactctg
agggcacgtatgcacagcacacgcatcaaaggttgcacggtggctcagagcgcctaccag
cacctcacactcatctctgggccagaggatggcgagatccaccctgaaatatgcaggctg
ttcatccagctgcagtgctgcttggagatgtacatcaccgagatgctcaagtccttgtgt
ttgttgggtgtgctgcagctccacaggaaaggaaacgagccgtgccctgagtcaaatgca
gactgcagggtggatgaaagttctgatgtcccaatattggaggacaggtcttcatcacct
atcgacttccctcatgaatcctggcttgtgtgcacagatattgaaaacatagagagtgac
atgcgtgagatgagaaatctgctaagcaaactcagggagactatgcctttgccactgaag
aaccaagatgacagcagtttgctgaacctgacaccatacccattggtgaggcagaggaag
aggcgtttctctgggctctgctgccttgtgtcaggatgcaaaaaaatttgtgctttaatg
ggtcacatcaggttcctcctcacattccttttaatcctggcctcagtcacagccattttt
ggctgttactgtgatcattattcatggacttcgtggtccatttgcactaagacttgtgag
caggggactcaggaacgtaccagaaatgtccagtatgatgattactggaacaagcacaac
tgtgcaaggctatgtcagatacatgagcgccggacatgtaacgtggatccatgtcctata
aactgcgaactgactagttttggaccctggtcagagtgttcaccctgtgccaaaaaaatt
tttagaaccaggtatgtccagaggcctgcccagtttgggggacaggactgcaatgaacct
ttgatggaggaactaccttgtcatccttctaaagaatgtgcaattgaaaaactcaactgc
aaggacaaattcacttgtgataacggcagatgtataaaagctaaccttgagtgtaacggc
cagaatgactgcctggacaactctgatgagaagaactgtggcaaaattaattatgtgtgt
cctgaacaaagaaatttttacgtcattcctggagtggatctcattggaaatgggtttgat
gttattgcagagaagaagagagctgctgtcctagacaactccttcttaggggatgaatgt
gtcttaaaccgcagcagagaaaacagaaaaatctaccgcatcccagccaacattgagatc
tataacataaaagtggaacaacttgaggacattaaggagagcccacccgtgcaagcaaat
gagatcaccttgtctagtcagagatcttatactggagatactctaatggattcaggctgg
ggagtacccatcttgctcggctccttccaaagatcacacaagggaaattccttcaaagaa
gaactgaaggcatttcaaaaaaaggactctgagtacatccatcttcaccaggttatagca
acggctacttttaaaacaaaatcaactgacctatacctttcatacccatttctgaccttc
ctcaacaacctgcctttggactacaactatgccctttacaggcagatcttcgagatttat
ggaacccactactttagttctggtacaatgggagggcagtatgatctgctttttcaatat
gatcgtgaacagctcaaatctgaaggttgtagcacggcgcagtcctctaagaacatcaaa
aatgaattttcagtcttcctcctcctttattttacacattcacatagtcaaactcatgga
acaaccaccgaaactataaaatatgaaggatcatttatgcaaaaatctgagaaatccata
tcatcagtgaggggaggaagagcagagtatgccgcagctctgtcttgggaacagaaagga
tctccaccagacagcacgacttacaaggattgggttgcatctaccatagacaaccccggt
gtcatagattatgagctgaagcccatgctggatcttgtacgtggcattccctgtgctgtg
actaagaggcggcacatgcggagggctatggctgagtatatgcaatccttcgattcatgt
aaatgtgccccatgtcccaataatggccgtcccacattgtcaggaacagagtgtgtgtgt
atatgccagactggaaccttcggagacaactgcattaaacgagctaaggactacacctca
gtggcagttgatggttactggacctgctggagctcttggagtgtttgtgatgcgagctta
acaaggagccgcacccgttcctgtagcaaccctactccccaaaatggaggtaaaccctgc
cagggcccagctcgtcagcaggacgagtgcaaaatctctatcttccaagagaaggatgtg
tgtatcaatgatgatgactttacgtatgaaggagactctgagagtgttctgccatcggga
gcgactggttgtgccaaacccagacctcctgccaacagtcatctcagatttaacaagcgt
gtatatgattatggagatcctgaggagtttgtgtgtttcactggttatgagctgaaaggt
taccaaatcattcggtgtcggcaggatggaaaatgggagaaggcaaagggcagctgcatc
aagagggtatgctccagacctaatctgccaaatgatgtgaagataagccccatcaaagaa
gagtacagtattggttccagtttctctctaagctgctcaggcagagccatgagcctatca
ggaccacgctactacacctgcactgaagcacttacctgggacccgtccattcctgctgac
atacactgcgaaagtgatgaggtctttacacaagacagcagctgtcccttgggacaacac
cgcatgggttccacatgtgtctgcattcctcgagaagactgcaggaagtataaggacgat
gtttgtgctttggacgtgacaaaaggcagtgccgcaatgatgtccatctgctcctttcac
gccaaccgttgccatggagacaagttgcaattcattaacgatggtccatgtaaagggaac
gtgaactgggccgtgttcagggccagcctttctcagaagagctcggtgcaggagccatgt
ggattagacacctgttacgagtgggagatctgcacaggtttggatatctgtcactgcaaa
attcccagggactgttcaacgaccgagggaaaagcctactgtgtgactatcctgaagcct
tttaggcagcagaccatgaatctgtgcaagttggctaccatgaagtgcagtgggatacaa
ttggaaattcatcatgaaggtgaatgttaa
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