Silurus meridionalis (southern catfish): 124398231
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Entry
124398231 CDS
T08004
Name
(RefSeq) sodium- and chloride-dependent betaine transporter-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
124398231
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smeo02000
]
124398231
Transporters [BR:
smeo02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
124398231
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
124398231
NCBI-ProteinID:
XP_046724274
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Position
15:complement(14322658..14326716)
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AA seq
582 aa
AA seq
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MENAQQRRAADKDLGERGQWSNKVEFLLAVAGNIIGLGNVWRFPYLCYKNGGGAFLIPYI
LFAATCGVPLFVLNICVGQYTKQSAATSWGKLCPLAGGFGHAGCVFALYFCLGYNLILAW
ALFYFFASFSSQLPWISCDNLWNTVNCVDLLASQINLTESRTQRNFSISAVIEFWEGRTL
NVSSGIETLGKLNWEILLCLLAAWVACYFCTWKGVKSAGKAVYCTAIFPYVMMLVLLLRG
LTLPGALQGIKYYLYPQPSRLTDPQVWIDAGTQIFFSYSLGAGTLTVLASYSPYNNNCYR
DGIWLCVLNSCTSFVAGFVVFSVLGFMAETLGVGIEDVARPGPGLAFITYPQAVAMMPLP
QFWSTCFFIMMIFLVLDTQFVGIEVVITSIIDIFPTVLRKPHRRELVLLFFCSGCFCFQI
ILTTQAGVYIFHLIDYYGFNGACYFFMCLIEALVIGWIFGADRMIDIIEDMCDKKPSAFF
KYCWRYFTPLMCLGAFILCIVKYQPLMYNNVYVYPTWTCVLGWLMTVFAPVLVITWGLVK
LCSHSGTLKQRFKSLCTPDDKLPLTRKQRAQLQISETLMGGI
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgcacagcaaaggagagctgctgataaagatttaggtgaacgaggccaatgg
agcaataaagtggagtttctattagctgtagccgggaatattattggtctgggcaacgtc
tggagattcccatacctgtgttacaaaaatggaggaggtgctttcctgataccttacatt
ctttttgctgcaacatgcggtgtgcccctctttgtcctgaacatttgtgttggccagtac
acaaagcagagtgcagcaacatcctggggaaaactttgtccattagcaggaggcttcggg
catgcaggatgtgtgtttgcattgtacttctgccttggctacaatctcatcctggcttgg
gctcttttttacttttttgcctcttttagctcccagttaccatggattagttgtgataat
ctctggaacactgtcaactgtgtggatctattggcaagccagatcaatctgactgaaagc
aggactcagaggaatttcagtatttctgctgtcattgaattttgggaggggcgaacgcta
aatgtctcttctgggattgagaccctgggaaaactgaactgggagattttactatgttta
cttgctgcttgggtggcctgttatttctgcacctggaaaggggtcaagtcagctggaaag
gccgtgtattgtacagccatctttccatatgtaatgatgttagtgctgctgctaagaggt
ttaactttacctggcgcactgcagggtatcaagtattacctttatccacaaccctcacgc
ctcacagacccacaggtttggattgatgcaggaacacaaatatttttctcctacagtctg
ggagctggtaccctaactgttctggcaagttatagtccttacaataacaactgctacaga
gacggtatttggctatgtgtgctcaacagctgcactagttttgttgctggatttgttgtc
ttttctgtccttggtttcatggcagagacactgggtgttggtattgaagatgtagcacgc
ccaggtccaggtctggcatttataacataccctcaggcagtggcaatgatgcccctgcca
caattctggtcgacctgtttctttatcatgatgattttcttagtcctggatacacagttt
gttggaattgaggtggtcattacctcaataatcgacatattcccgactgtactccggaaa
ccccataggagagaacttgtcctgttatttttctgcagtggctgtttctgctttcagatt
attttaacaacgcaggcaggggtctacatttttcatctaattgattattatggatttaat
ggtgcttgctacttcttcatgtgtctaattgaagctctagtaattggatggatttttgga
gctgatcgtatgatcgatattattgaggacatgtgtgataagaaacccagtgcatttttt
aaatactgctggcgttattttacaccactgatgtgcctgggagcttttattttgtgcatt
gtgaaatatcaacctctaatgtacaacaatgtttatgtatatccaacctggacatgtgtt
cttggatggttaatgactgtatttgcaccagtgctggtcattacatggggattagtgaag
ttatgcagccactcagggactctaaaacagcgttttaaaagtctgtgtactccagatgac
aaacttcctcttacccgaaagcaaagagcacagctacagatcagtgagactctaatggga
ggaatctga
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