KEGG   Silurus meridionalis (southern catfish): 124398234
Entry
124398234         CDS       T08004                                 
Symbol
skp1
Name
(RefSeq) S-phase kinase-associated protein 1 isoform X1
  KO
K03094  S-phase kinase-associated protein 1
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03083  Polycomb repressive complex
smeo04110  Cell cycle
smeo04114  Oocyte meiosis
smeo04120  Ubiquitin mediated proteolysis
smeo04141  Protein processing in endoplasmic reticulum
smeo04310  Wnt signaling pathway
smeo04350  TGF-beta signaling pathway
smeo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    124398234 (skp1)
   04120 Ubiquitin mediated proteolysis
    124398234 (skp1)
  09126 Chromosome
   03083 Polycomb repressive complex
    124398234 (skp1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    124398234 (skp1)
   04350 TGF-beta signaling pathway
    124398234 (skp1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    124398234 (skp1)
   04114 Oocyte meiosis
    124398234 (skp1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124398234 (skp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smeo04131]
    124398234 (skp1)
   04121 Ubiquitin system [BR:smeo04121]
    124398234 (skp1)
   03036 Chromosome and associated proteins [BR:smeo03036]
    124398234 (skp1)
Membrane trafficking [BR:smeo04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    124398234 (skp1)
Ubiquitin system [BR:smeo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     124398234 (skp1)
   Cul7 complex
     124398234 (skp1)
Chromosome and associated proteins [BR:smeo03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     124398234 (skp1)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     124398234 (skp1)
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 124398234
NCBI-ProteinID: XP_046724277
LinkDB
Position
15:complement(9204319..9213272)
AA seq 164 aa
MMPTIKLQSSDGEMFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVI
QWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVT
CKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK
NT seq 495 nt   +upstreamnt  +downstreamnt
atgatgccaacaattaagctgcaaagctctgatggagaaatgtttgaagtggatgttgaa
atcgccaagcaatctgtaactataaagacaatgctggaagatttaggcatggatgatgaa
ggggatgatgatcctgttcctcttccaaatgtgaatgcagccatcctcaaaaaggtaatt
cagtggtgtacgcatcacaaagatgaccctccaccgcctgaggatgatgagaacaaagag
aagaggacagatgatatccctgtttgggatcaagagtttctcaaagtggaccagggcaca
ctttttgaactcatcctggcagcaaattatttggacatcaaaggattactagatgtcacc
tgcaaaacagttgccaatatgattaaaggaaaaaccccagaagaaatcaggaagacattt
aatatcaaaaatgacttcacagaggaagaggaagctcaggtacgcaaggagaaccaatgg
tgtgaagagaaataa

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