Silurus meridionalis (southern catfish): 124398248
Help
Entry
124398248 CDS
T08004
Symbol
dnai1.2
Name
(RefSeq) dynein, axonemal, intermediate chain 1, paralog 2
KO
K10409
dynein axonemal intermediate chain 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
124398248 (dnai1.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
smeo03037
]
124398248 (dnai1.2)
04812 Cytoskeleton proteins [BR:
smeo04812
]
124398248 (dnai1.2)
Cilium and associated proteins [BR:
smeo03037
]
Motile cilia and associated proteins
Dynein arm
124398248 (dnai1.2)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
124398248 (dnai1.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_Aladin
Beta-prop_ELP1_2nd
Motif
Other DBs
NCBI-GeneID:
124398248
NCBI-ProteinID:
XP_046724293
LinkDB
All DBs
Position
15:complement(3421798..3445511)
Genome browser
AA seq
701 aa
AA seq
DB search
MPVLQKPATMKTKEENNQIKAPAVKGGKVSNKKKDDEDGTEIGGEDEWMQKKTLVKPPDQ
LDLTEAELKEEFTKILTADNPHAPENSVKYNFKDQAYKPVNNVDQLAVHFTLEGNLLHKD
SDEARRQMANQGDAGENTATEPENGGENPDKPETPADGAEDAGDGEDGAGEERPESEDIQ
VEKQERKISNQFNFSDRASQTLNNPQRDRACQSEPPPRANFSATVNQWEIYDAYVEELQK
QKQETSKEKHKTPLFKKEEEKVKKKPVYVDSQIDEIAKVVKVAKIIERMVTQNTFDDIAQ
DFKYFEDAADEFREQEGTLLPLWKFQYEKAKPLTVTALCWNQKYKDLFAVGLGSYEFTKQ
GRGMLLFYTLKNSNHPEYIFHTTSGVMCLDIHKELSYLVAVGFYDGCVAVYNLKLNRPQP
IYKSTAKSGKHTDPVWQVKWQNDDIDKNHNFFSVSADGRVVSWTLVKNELLYTDIIRLSL
EGVVTEGEEDVKIPDMACGTALDFHKQIDYLFLVGTEEGKIHKCSKSYSSRFLETYIAHS
LSVDAVKWNHFHPKVFISCSSDWTVKIWDHTITNPMFTFNLNTAVSDVAWSPYSSTVFAA
VTTDGKVHVFDLSINKYEAICQQAVVSKKTKLTHIEFNPVYPIIIVGDDRGYVTSLKLSP
NLRKQPKEKKGQELPKGPEVEMEKLEKLLSQLRAPDRPVQK
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttctccagaaacctgcaacaatgaagaccaaagaggaaaacaaccaaatcaaa
gcacctgctgtaaagggaggcaaagtctccaacaaaaagaaggatgatgaggatggaaca
gagatcggaggcgaagatgagtggatgcagaagaagactctggttaaacctccagatcag
ctggaccttaccgaggcggagctgaaagaggagttcactaaaatactgacagcggataac
ccacatgctccagaaaatagtgtcaaatacaacttcaaagatcaagcctacaagccggtc
aacaacgtggatcagctggctgttcactttacgctggaggggaaccttctccacaaggat
tctgatgaggctcgaagacaaatggctaaccaaggcgatgcaggggaaaacacagccaca
gagccggaaaatggaggagaaaatccggacaagccggaaactccggcggatggggccgag
gatgcaggcgatggagaagatggcgctggggaagagagaccagagagcgaagacatccaa
gtggaaaagcaagagcgcaaaatcagcaaccagttcaacttcagcgacagagcttcacag
acactcaacaaccctcagagagaccgagcctgccaaagtgaacctcctcctcgtgccaac
ttctccgctacagttaatcagtgggagatctatgatgcctatgtggaggagctccagaag
cagaagcaggagacgagtaaggaaaaacataagacccctttgtttaaaaaggaggaagaa
aaagtgaagaagaagccagtgtatgtggacagtcagatcgatgaaattgccaaagtggtg
aaggtggccaagattatcgagcgcatggtgactcagaacaccttcgatgacatcgcacag
gattttaaatacttcgaagatgcggcagacgagtttcgagaacaagagggcacgcttttg
ccactgtggaagttccaatatgaaaaagccaagcctcttacagtaaccgcactctgctgg
aatcagaagtacaaggacctgtttgctgtgggactcgggtcatatgagttcacgaagcag
ggacgaggcatgctactcttctacaccctgaagaactccaaccacccagagtacattttc
cacaccacatctggtgtcatgtgtctggacatccataaagagctgtcctacctggtggcc
gtgggtttctatgatggttgtgttgcagtgtataacctgaagttaaacagacctcagccc
atttataagagtaccgctaagtcaggaaagcacacggaccccgtgtggcaggtaaagtgg
caaaatgacgacatagacaaaaaccataatttcttctcagtctccgctgatggacgggtg
gtgtcatggactcttgtgaagaacgagctgctctacacggatatcattaggctgtctttg
gaaggagttgttactgaaggagaagaggacgttaagattcctgacatggcctgtggaacg
gctctcgatttccataaacagatcgactaccttttccttgttggcactgaagagggcaaa
atacacaagtgctccaagtcctactcgagccggttcctggagacctacatcgcacacagc
ctgtctgtcgatgccgtcaaatggaaccacttccacccgaaggtgttcatctcttgtagc
tcggattggactgtcaagatatgggaccacacgatcacgaacccgatgttcacctttaac
ctgaacacagccgtgagtgacgtggcctggtctccatactcctccactgttttcgctgct
gtcaccactgatggaaaggtgcatgtgtttgacctgagcatcaacaaatatgaagccatc
tgccagcaggccgtggtctccaagaagaccaagctaactcacatagagtttaaccctgtg
taccccatcatcattgtgggagatgaccgaggctacgtcaccagcctgaaactctcgccc
aacctccgcaagcagccaaaggagaagaaaggtcaggagttgccaaaggggcctgaagtg
gagatggagaagttggagaagctgttgagtcaactgagggctcctgatagacctgtacag
aagtaa
DBGET
integrated database retrieval system
