Silurus meridionalis (southern catfish): 124398339
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Entry
124398339 CDS
T08004
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124398339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124398339
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124398339
04147 Exosome [BR:
smeo04147
]
124398339
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
124398339
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
124398339
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124398339
Exosomal proteins of other cancer cells
124398339
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
FPP
SlyX
HalX
Laminin_II
bZIP_2
TPR_MLP1_2
ZW10_C2
GIT_CC
DegS
bZIP_1
tRNA-synt_1e
Spc7
Motif
Other DBs
NCBI-GeneID:
124398339
NCBI-ProteinID:
XP_046724408
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All DBs
Position
15:complement(14099531..14101564)
Genome browser
AA seq
393 aa
AA seq
DB search
MRGSGYSQKTLTVNGSSRMRVQSPSPSRCRASSASSVTRGRTGFQAGAVEVGTELHQLHA
NEKEEMQLLNARFAGYIEKVQALEQRNATLREELQMLQSRYKAGPGGLAEEYEAKFKEMK
ELIAALTAEKGAADIERGYVEEEVELWTMKLEEELTLKEEAEMILREFREDVDNATLQKA
DLEKRVEQLVAEIEFLKKLHSEEVAELMKQIEESKTTVELDTDRPDLAAHLRKTRAEIEA
VAARNVQEAEKWYKGKFDTLKESASKRETQMSIMKQEISTLSSAASDLQNQIDGLRAKNA
ALEQQLDDMEMSHLDKVSNLEAIIEQLENQLCETKMEMGKYLADYQELLNIKLKLDVEIA
TYRKLLEGEERRLGISISESTAGTSSSAVKDSA
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaagcggctattcccagaagactctaacagtgaatgggtcaagcaggatgcgg
gtccagagcccgtctccgtcccgttgcagagcttcttcagcctcatcggtgacccgtgga
cgtaccggcttccaggctggtgccgtggaggttggcacagagcttcatcagcttcatgct
aacgagaaagaggagatgcaattactaaacgcacgctttgccggctacatcgagaaggtt
caggctctggagcagaggaatgccacgctcagggaggagctgcagatgctgcagagccga
tacaaggcaggaccggggggactggctgaggagtatgaggccaaatttaaggaaatgaag
gaactgatcgcagcactgacagcggagaaaggagcggctgatatcgagaggggatatgta
gaggaggaagtggagctctggaccatgaagttggaggaagaactcacacttaaagaggag
gcagagatgatcctgcgtgagttccgtgaggatgtggacaatgccacgctgcagaaggct
gacctggagaaacgtgtggagcagctggtggctgagatcgagttcctgaagaagctgcac
agtgaggaagtggctgagctaatgaagcaaattgaggaatcaaagacgaccgtagagctt
gacacagatcggcctgatttagctgctcacctgcgcaagacacgtgctgagatcgaagct
gtcgccgcacgaaatgtccaggaggcagagaagtggtacaaagggaagtttgacacactg
aaggagagcgcctccaagcgtgagacccagatgagcatcatgaagcaggagatcagcacc
ctgagcagtgcagcgtctgacctgcagaaccagatagatggcctcagggccaaaaatgcg
gctctggaacagcagctggatgacatggagatgtctcacctggacaaggtgtccaacttg
gaagctatcatagagcagcttgagaaccagctgtgtgaaactaaaatggagatgggcaaa
taccttgctgactaccaggagctgcttaacatcaaactgaagttagatgttgagatcgcc
acctacaggaaacttctggaaggagaagagagacgactcgggatctcaatcagcgaaagc
actgcaggaacttcatcatctgcagttaaagactcggcctaa
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