Silurus meridionalis (southern catfish): 124398348
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Entry
124398348 CDS
T08004
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
smeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124398348
04082 Neuroactive ligand signaling
124398348
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124398348
Ion channels [BR:
smeo04040
]
Ligand-gated channels
GABA-A
124398348
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
124398348
NCBI-ProteinID:
XP_046724431
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Position
15:528727..568295
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AA seq
533 aa
AA seq
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MATFRRRRKWNWVQISVLFMMVASVWAQSVNDPSNMTLVKETVDRLLKGYDIRLRPDFGG
PPVRVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLKLTLDNRVADQLWV
PDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLE
IESYGYTTDDIEFYWRGENIAVSGVERIELPQFSIVDYNLIAKKVVFSTGAYPRLSLSFK
LKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLP
KIPYVKAIDVYLMGCFVFVFLALLEYALVNYIFFGQGPQRQKKAAEKASKANNEKLRMDP
NKWLMGNVVQRNDALYARMKPRDIDAHDALWEPIFVDDAAIGLGGLGGLGGLGEQKNKMD
PHENILLTPLEMKNEMSASELTLGLGDPRGTMLAYDSSALQYRKPGLGRGSFGRNALERH
VAQKKSRLRRRASQLKITIPDLTDVNSIDKWSRMIFPTVFSFFNIVYWLYYIN
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcgactttccggaggaggagaaaatggaactgggttcagatttcggttttgttcatg
atggtggcttcggtttgggctcaaagtgtgaatgatccgagcaacatgactctggtgaag
gaaactgtggaccgactgctgaagggatacgacatcagactcagacccgatttcggaggt
cctccagtgagagtggggatgaacatcgatattgccagcatagacatggtctcagaagtc
aacatggactacaccctgaccatgtacttccagcaggcctggagagataaacgtctctcg
tactcagagattcctctgaaactcactctggataatcgtgtagctgatcagctctgggtc
ccggacacatacttcctaaacgacaagaagtcctttgttcatggtgtgacggtaaaaaac
aggatgattcgcctgcacccggacggcacggtgctctacggcctgaggatcaccacgact
gcagcctgcatgatggatttgagacgatatccactggatgagcaaaactgtactctggaa
atcgagagttacggctacacgacggacgacatcgagttttactggcgaggtgagaacatt
gcggtgtctggagtggagagaatcgagctgccccagttctctatcgtcgactacaacctc
atagccaagaaggtggtgttctctacaggagcttaccctcgcctgtccctcagcttcaag
ctgaagagaaacatcggctacttcatcctgcagacctacatgccttccatcctgatcacc
atcctgtcctgggtctccttctggatcaactacgatgcctctgctgctcgagtcgcttta
gggattacgacggtcctcaccatgacgaccatcaacacacacctacgagagacgcttccg
aaaatcccgtacgttaaagcgatagacgtgtacctgatgggctgcttcgtcttcgtcttc
ctcgccctgctcgagtacgcgctcgttaactacatcttcttcggtcagggacctcagcgg
cagaagaaagcggcggagaaagcatccaaagccaacaacgagaagctgaggatggatcct
aacaagtggttgatgggaaatgtagttcagagaaacgatgctctgtacgccagaatgaaa
cccagggatattgacgctcatgacgcgctgtgggagccgatctttgtggacgatgcggcg
ataggactgggtggactgggtggactgggtggactaggcgaacaaaaaaataagatggac
cctcatgagaacatcctcctcacacctctggagatgaagaacgagatgtcggcgtcggag
ttgactctgggcctcggcgacccgcgcggcaccatgctagcgtacgatagctcggcgtta
cagtaccgcaagcccgggctcgggcgggggagcttcggccggaacgcgctggaacgtcac
gtggctcagaagaaaagccgtctgaggagacgtgcctcacagctgaagatcacaatccca
gacctgaccgatgtcaactccatcgacaagtggtccaggatgatcttccccacagtcttc
tcctttttcaacatcgtctactggctgtactacatcaactga
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