Silurus meridionalis (southern catfish): 124398358
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Entry
124398358 CDS
T08004
Symbol
abraxas1
Name
(RefSeq) BRCA1-A complex subunit Abraxas 1
KO
K20774
BRCA1-A complex subunit Abraxas
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124398358 (abraxas1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124398358 (abraxas1)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
124398358 (abraxas1)
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Gene cluster
GFIT
Motif
Pfam:
MPN_2A_DUB_like
JAB
EncFtn-like
UPF0184
Prefoldin_2
Motif
Other DBs
NCBI-GeneID:
124398358
NCBI-ProteinID:
XP_046724448
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Position
15:complement(12874721..12883307)
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AA seq
395 aa
AA seq
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MEEYSTTVRTSGFVLSSLMFQHLNSDCDVEGLLLGESVGEENSKITDSQTDHIQFVHTIN
IQKHITCKTTHSFYNNTCEVDQEKIRQVLSNLKEENVIGWYRQRRNTSQQMTLKEQLVHQ
NLRKLLPYQELVFLLLTPSEVTMSHSTHRLEYTAFLWNGSQYSNIPVSVSNLGTLEQQDY
WRVSATCPSLSHCQAIKQHRAKFFSSEQDLREVENVNDMNDALLDEMKSACVRVERSERR
VEKLQAEIAELKKAIRERRKKQQANETTESSPAEEPKENVLLCTALKALFPNTPSLRCQT
LSVEGFPVLNRCCVEDHGVDVSTRMPLLLLQCGNVARKRRINSGYRPKGKFQSTGILQKG
KKRKVETELSEVLSGSESGTEVEVSSPNQGNSPVF
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatacagcaccactgtgagaacatccggattcgtcttgagttcattgatgttc
cagcatctgaacagtgactgtgatgtggagggattattacttggtgagagtgtcggagag
gagaacagcaaaatcacagactcccagacggaccacatacagttcgtacatacaataaac
attcaaaaacacatcacttgcaagaccactcacagcttctacaacaacacctgtgaagtg
gaccaagagaagattaggcaggttctgtccaatctcaaagaggagaacgtgattggctgg
tatcgccagcggaggaacaccagtcaacaaatgactttaaaagagcagttggtccatcag
aatttgaggaagctgctgccctatcaggaacttgttttcttgctcctcacaccatccgag
gtgacgatgtctcactccacccaccgcctagagtacacagccttcttatggaatggcagt
cagtacagtaatatcccagtctcagtgagcaacctggggactctggagcagcaggattac
tggagagtctctgctacatgtccatctctgagtcactgtcaagccattaaacaacacaga
gccaaattcttctcttcggagcaggatctccgagaggtggagaacgtcaacgacatgaac
gacgccttgttagatgaaatgaagagcgcgtgtgtgagagtggagaggagcgagcggaga
gtggaaaagctacaggcagagatcgcggagctcaaaaaggccatcagagagcggaggaaa
aaacagcaggccaatgagaccacagaaagttctcctgctgaagaacccaaggagaacgtg
ctgctttgcacggctctgaaagcactgttccccaacacaccatcgttacgctgccagact
ctgagtgttgagggtttccccgtactgaacaggtgctgcgtcgaggaccacggggtcgat
gtttctaccagaatgccgcttctgctactgcagtgtggtaacgtggcgaggaaaaggagg
ataaactcgggctacaggccaaaggggaaatttcagtccacgggaattttacagaaaggt
aaaaagaggaaagtggaaacggagctgagcgaggtgctgtctggaagcgagtctggcacg
gaggtggaggtgagcagcccaaaccagggcaactcgcctgtattttaa
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