Silurus meridionalis (southern catfish): 124398398
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Entry
124398398 CDS
T08004
Symbol
nedd4l
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04120
Ubiquitin mediated proteolysis
smeo04144
Endocytosis
smeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124398398 (nedd4l)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124398398 (nedd4l)
09144 Cellular community - eukaryotes
04530 Tight junction
124398398 (nedd4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124398398 (nedd4l)
04121 Ubiquitin system [BR:
smeo04121
]
124398398 (nedd4l)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124398398 (nedd4l)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
124398398 (nedd4l)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
HECT type E3
124398398 (nedd4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
MUG113
Motif
Other DBs
NCBI-GeneID:
124398398
NCBI-ProteinID:
XP_046724528
LinkDB
All DBs
Position
15:complement(926652..966902)
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AA seq
1005 aa
AA seq
DB search
MAANIEPIYGLSEDENESRVLRVKVIAGIDLAKKDIIGASDPYVKLSLYVADENRELALV
QTKTIKKTLNPKWNEEFYFRVCPQNHRLLFEVFDENRLAHTGSDRHKNGLFHSGQTRDDF
LGQVDVPLNCLPTEDPAMERPYTFKDFLLRPRSHKSRVKGYLRLKMAYLPKNGAQEEESG
EMREEAEGWEVDSVEHSGSRRSQQVLPPLPAGWEEKVDNLGRTYFVNHNNRTTQWKRPST
VDVVSETENDNQLRQINQEAHRVFRSRRHISEDLENEHLDLRELDDSWDPITEEDFSGMS
EAVAGPASTATPIHQFSTPEFSEEISMRLSLTPNANGEIGGANNTGSLLSSRLRSSSMTD
GVSDQAQTPSPMQTSQSRRTRAQTVTGLEQPQSPSLSAAYTHYDSSLPSGWEERKDTKGR
TYYVNHNNRSTTWTRPILQHTEDGVSSPAGAVGGAVATTPSSSGHLSEPQMRRPRSLSSP
TVTLSTPPEGANSTPLPRVPKDTLSNPQSPQPSPYSSPKAQHKVTQSFLPPGWEMRIAPN
GRPFFIDHNSRTTTWEDPRLKYPVHMRVKGALDPGDLGPLPPGWEERVHADGRTFYIDHN
TKNTQWEDPRLQSPAITGPAVPYSREFKQKYDYFRKKLKKPADIPNRFEMKLHRGSIFEE
SYRRIMSLKRPDVLKSRLWIEFESEKGLDYGGVAREWFFLISKEMFNPYYGLFEYSATDN
YTLQINSNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIRPFYKMMLGKPITLNDME
SVDSEYYNSLKWILENDPTELDLRFCIDEDNFGQTYQVDLKPSGSDMVVTNDNKKEYIDL
VIQWRFVNRVQKQMNAFMEGFTELILIDLIKIFDENELELLMCGLGDVDVNDWRQHTVYK
NGYCPNHPLIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQW
GTPDKLPRAHTCFNRLDLPAYESFDDLREKLLMAVENAQGFEGVD
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaatatcgagccaatttatggactttcagaagacgagaatgagtcgcgcgtc
cttcgtgtcaaggttattgcaggcattgatctggcaaagaaggacattattggtgccagt
gatccttacgtgaagctctctctgtatgtggctgatgaaaaccgcgagctcgccttagtc
cagaccaaaaccatcaaaaagactctgaacccgaaatggaacgaggagttttatttcaga
gtgtgtcctcagaaccacaggctcctcttcgaggtgtttgatgagaacagactggctcac
actggttctgatcgacacaagaacggacttttccactccggccagacacgagatgatttc
ctgggacaggtggatgtgccactgaattgcttgccgacagaagatccagcgatggagcgg
ccctacacgtttaaagacttcctcctcaggccaagaagtcataagtcgagggtgaaaggt
tatctgaggctgaagatggcgtacctgccgaagaacggtgctcaggaggaggagagcggt
gagatgagggaggaggctgagggctgggaggtggactcagtggagcacagtggttctcgt
cgttctcagcaggttcttcctccgttgccggcaggttgggaggagaaagtcgataatctc
ggccggacgtattttgttaatcacaacaaccgaaccacacaatggaaaagacccagtacg
gttgacgtggtgtcagagacggaaaacgataatcaacttcgtcagatcaaccaggaagct
caccgcgtgtttcgctccagacgccacatcagcgaggacctggagaacgaacatctcgac
ctccgagagctcgacgattcctgggacccaatcactgaagaggatttctcggggatgagt
gaggctgtggctggccccgcctccactgccacacccattcatcagttcagcactccagag
ttctcagaggagatcagcatgaggctctcactcactcctaacgccaacggagaaataggc
ggagctaacaataccgggtctcttctgtcctccaggctgcgttcctccagtatgactgat
ggagtgagtgatcaggctcagactccctctcctatgcagacgtcgcagtccagacgaacc
cgagcccaaacagtcacaggcctagagcagccccaatcaccttcactctccgctgcttat
actcactatgactcttccttgccctcaggttgggaagaaagaaaagacactaagggccgg
acgtattacgtcaatcataacaatcgcagcacgacgtggacacgccctattctccagcac
actgaagatggagtgagttcccctgcaggagctgtaggaggcgctgtagcaaccacacct
tcatccagcggccacctcagtgaaccccaaatgcgccgacctcgtagccttagttctccg
accgtcaccctgtccacgcctccagagggagccaatagcacgccgcttcctcgggtcccg
aaagacacgctctcgaacccgcagtcaccccagccctcgccctacagctcgcccaaagct
caacacaaggtcacacagagcttcctgcccccagggtgggagatgaggatcgccccgaac
ggacggccgtttttcatcgaccacaacagcagaacaaccacatgggaggacccaaggtta
aagtatccagttcacatgcgggttaaaggagcgcttgaccccggtgacctcggcccactt
cctccggggtgggaggagcgagtccatgcagatggtagaacattttacatcgaccacaac
acaaagaacacgcagtgggaggatcctcgactacagagtcccgctatcacaggaccggct
gtgccgtactcacgagagtttaaacagaagtacgattacttcagaaagaagttaaagaag
ccggcggacattcctaaccgttttgagatgaagttacacagaggcagtatatttgaggaa
tcctacaggaggatcatgtccctgaagaggcctgatgttttgaagtctcgcctctggatc
gagtttgagtctgagaaaggactcgattacgggggcgtggccagggagtggttcttcctt
atctccaaggagatgttcaacccttattatgggctgtttgagtactcagcaacagataat
tacacactccagataaattcaaactcaggactgtgtaacgaggatcatctctcgtacttc
aagttcatcgggcgagtagcaggcatggcggtgtatcacggcaagctgctggacggtttc
ttcatccgacctttttataagatgatgctgggaaaacccatcacgctgaacgacatggag
tcagtggacagtgaatactacaactccctgaagtggattctggagaacgacccgaccgag
ctggacctgcgcttctgtatcgacgaggacaacttcggccagacataccaagtggatctg
aagccgagcggatctgatatggtcgtcaccaatgacaacaagaaggagtatatcgatttg
gtgatccagtggcggtttgtaaacagggtgcagaaacagatgaacgccttcatggaggga
ttcacagaactgattctcatcgacttgattaagatctttgatgagaacgagttggagttg
ctgatgtgtggtctgggtgacgtggacgttaacgactggagacagcacacggtgtataaa
aacggatactgccccaatcaccccttaatacagtggttctggaaggccgtgttgttgatg
gatgctgaaaagaggattcggctgctacagttcgtcacaggaacatccagagttcctatg
aatggtttcgctgagctctatggttcaaatggcccgcagttgtttactatcgagcagtgg
gggactccagacaaactcccccgtgcacacacatgtttcaatcgtttggatctgccagca
tacgagtcgtttgatgatctgagggagaagctgctaatggctgtggagaacgcacagggc
ttcgagggagtcgactag
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