Silurus meridionalis (southern catfish): 124398435
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Entry
124398435 CDS
T08004
Symbol
cdk9
Name
(RefSeq) cyclin-dependent kinase 9
KO
K02211
cyclin-dependent kinase 9 [EC:
2.7.11.22
2.7.11.23
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124398435 (cdk9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smeo01001
]
124398435 (cdk9)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124398435 (cdk9)
Enzymes [BR:
smeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
124398435 (cdk9)
2.7.11.23 [RNA-polymerase]-subunit kinase
124398435 (cdk9)
Protein kinases [BR:
smeo01001
]
Serine/threonine kinases: CMGC group
CDK family
124398435 (cdk9)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
124398435 (cdk9)
Brd4/P-TEFb complex
124398435 (cdk9)
7SK RNP complex
124398435 (cdk9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Kinase-like
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
124398435
NCBI-ProteinID:
XP_046724586
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All DBs
Position
15:8663497..8673815
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AA seq
394 aa
AA seq
DB search
MQRDKTGSTAVAGDKPDRETAIMSKYYDGVEFPFCDEFSKYEKLAKIGQGTFGEVFKAKH
RQTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATQFNRYKGS
IYLVFDFCEHDLAGLLSNVNVKFTLSEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLIT
RDGVLKLADFGLARAFSLAKNSQGNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCI
MAEMWTRSPIMQGNTEQHQLTLISQLCGSITAEVWPGVDKKYELYQKMELPKGQKRKVKE
RLKAYVKDPYALDLIDKLLVLDPAQRVDSDDALNHDFFWSDPMPSDLKHMLSTHNTSMFE
YLAPPRRRGHMPQQPANQNRNPATASQSEFDRVF
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgagacaagacaggaagcacggcggtggccggtgataaaccggaccgggagacc
gccatcatgtccaaatattacgatggcgtcgagtttcctttttgcgacgagttctcgaag
tacgaaaagctcgccaagatcggccaaggcacattcggagaggtgttcaaggccaaacat
aggcagactggcaaaaaagttgctctgaagaaggtgcttatggaaaatgagaaagaaggg
tttcccatcactgcactaagagagatcaagatacttcagcttctgaagcatgagaatgtt
gtaaatctaatcgagatctgtcgaacaaaagccacacagtttaaccgttacaagggcagc
atatacctggtgtttgatttttgcgagcacgatcttgccgggctgcttagcaacgtcaac
gttaaattcacactgtccgagattaagaaagtcatgcaaatgctgctaaacggactctac
tacatccacagaaacaagatcctgcacagagacatgaaagcagcaaacgtgcttatcaca
agggatggtgtactaaaacttgctgattttggcttggcaagagccttcagcctggcaaag
aacagccagggcaatcgctataccaaccgagtagtgacactgtggtaccgacctccagaa
ctcctgctgggagagcgtgattacgggccacccatcgatctgtggggtgcagggtgtatc
atggcagaaatgtggaccaggagccccatcatgcaaggaaacacagaacagcaccaactc
actctgatcagccagctgtgtggctccattacagcagaagtatggcctggtgtggataaa
aaatatgagctgtaccagaagatggagttacctaagggacaaaaacgaaaggtaaaagaa
cgcctgaaggcgtatgttaaggacccatacgcccttgatctgattgataagctactggtg
ttggacccagcgcagcgtgtggacagtgacgacgctctaaaccacgacttcttctggtct
gaccccatgccctctgacctcaaacatatgctctccacacacaacacatctatgttcgaa
tacctggcacccccgaggcgccgcggtcacatgccccaacagccggccaatcagaatcgc
aacccagctacagccagccagtctgagtttgaccgggttttctga
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