Silurus meridionalis (southern catfish): 124398479
Help
Entry
124398479 CDS
T08004
Name
(RefSeq) clustered mitochondria protein homolog
KO
K03255
protein TIF31
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
smeo03012
]
124398479
Translation factors [BR:
smeo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
124398479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
CLU_N
TPR_10
TPR_NPHP3
TPR_2
GSKIP_dom
TPR_MalT
TPR_8
TPR_1
DCP1
Motif
Other DBs
NCBI-GeneID:
124398479
NCBI-ProteinID:
XP_046724674
LinkDB
All DBs
Position
15:21835936..21853673
Genome browser
AA seq
1683 aa
AA seq
DB search
MGNLLQCCLRHLFRCKDVPERIEEQSPLLSRENSDVESLSPSTSDMLASPVLDQDHLLYP
DIVLSSSHRANLDMADVSQQVELVLPERGQNKKQTSVKEDFQEDEMPSTRISQREFHYLD
RNQLCTTENEWPLLSALRSWPSEQSNASNLVSHTFIYTHGQETRYWQDSSCQGVQFLAQR
NQASHQQVFSESTSPGTFRTPSSDSQAKGSSETETDIIGVNESGIQDEDKEGTLGKETEQ
MELNMVHRDQNGAQLGQEVAQRANYVLSNVAECEQSAVCSDANAAQRGVAKMNLNESNQT
KHSPVQSGQTEAQHRPSTAQTEEKRQDTVILISQNEENKELAVRLQTDQDIERNQEEMAQ
NPELMLELDSIQTEGDATEITKTSTQHIPGNEAKFASNIQGVVKFRTLNEEQNGERSEDK
DQDKIGPNLYQRPVKNEQFTLFVVDKLFLATPNIAGQSPNNMLSDQTEISELNRYRDKEL
QEDPDSVDLDPTEDTGLTIRIQAPGTEATDFQASPLAMVQEIKQVLMDREETCYRTCFSL
QLDGNTLDNFSNLKAISGLQEGSLLKIVEEPYTVREVRLHLRHIRDLLKSLDLTDAYNGI
EGSSLSFLRFFTEDRIEGEMQQKEKAEDVMQFNCSPPEYILPGTKECLLGPLQPQSENLK
SIECLKVLMTSNWNPPPGNRKIHGDLMYLNVLTMEDRQFSITASTRGFYLNQSTTYNFNP
KPENPSMLSHSLVELLNQISPVFKKNFSLLLKRRISTHPFERIGTPLQVFSWTAPTLDHS
MDCVRAEEASSSQLYYEGHVPGQVCDWNEELQSTRELPSQSLRDRLLRDRAIFKVNSDFV
STATRGAMAVVDGNVMPINPSEEPHNHMYVWNNIFFSLGVDGHEQYKEVGGEAAAYVASA
IDLNGVRAYSALDTDGLYVLGTVLVDYRGYRITAQSIVPGILECDQEQSVIYGSTDFGKT
VVSNEQFLKLLEKPSKHLRVQRHFVLNKDDSAVELCSSVECKGIVGNDGRHYILDLLFTF
PPDLNFLPVEGEELNTECQQLGFPMQHRHRLVCLRQELIEAFVKYRHQLYMSTESQSLDQ
ESNRIRDVELPDSPEEDALDPTPDVSSKHVDIDKNNSLHRSMHSSSSDIRFNPDIFSPGV
RFPKECLQDIQEQKQLLKDTAAFLVSTQIPNLIKSCVDHTTMPMDGLTLTEALHQNGINI
RYLGIVLEFIEKSPQKTKLDHVYRIALCELITRCAKHTFRTYLLAVESSSLSVSVSHFLN
CFLSSSPEVLGTQQMDRLSSKRRSRRRRSRGSSSGKVPSVGGALTSLTSSELWRTIQAEA
QEYYHYSLPCDSIEQAVDKCGLQRITLLREICIKTGIQIHIREYQFDGKQRPAFSEEDIL
NIFPVIKHVIPKANDGIYFLHCGQASIQQGNLKEGCELISQALSLFTNVYGALHQDVCIC
LRLLGRIYYILGDYAEALSHQQKAVLISERVLGIDHPNTIQEYKHLGLYCFAGGQTSTGL
RLLYRARYLMLLVCGEDHPEMALLDSKIGLVLHGMMQCDLALKFLENALALTSKYQGPTS
LKVAQGRHLLAKVHESKGDFRSALRHEKERYVIYRSQVGEAHEKTQESSEYLKHLTNQAV
LLQRTMNMIYANRSGSSITPLTLAAPSRLWIVEQLNLVNGIVLIPLSNTDLESLRDHPQK
TSA
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacctacttcagtgctgtctcaggcatttgttccgctgtaaggacgttcctgag
cgaatcgaagagcaatctccgctcttgtcaagagagaatagtgatgttgaaagcctctct
ccatcaacgtctgacatgttggcatctcctgtcctggatcaggaccacctcctttaccct
gacattgtccttagcagtagtcaccgagcaaacctggacatggctgacgtctcacagcag
gtagagcttgttttaccagagagaggacaaaacaaaaagcagactagtgtaaaagaggat
tttcaagaagacgaaatgccaagcacaagaatcagtcaacgggaatttcactatttggac
cgaaatcagctatgcaccacggagaacgaatggcccttactatcagccttgcgttcatgg
ccatcagagcaatcgaatgcttcaaatttagtttctcacacctttatctacacacacgga
caggaaaccaggtattggcaggattcctcttgtcaaggagtgcagttcttagcacagaga
aatcaagcaagccatcaacaagttttttcagagtccacatcccctggtaccttcaggaca
ccttcatctgacagccaagcaaaaggatcttcagagactgagactgacatcattggagta
aatgaaagtggaattcaagacgaggacaaagaaggaactctgggaaaagaaacagaacaa
atggagctaaacatggtacaccgagaccagaacggagcacaactgggacaggaagttgca
cagagagcaaattacgttctcagcaatgtagccgagtgtgaacaaagtgctgtatgttca
gatgcaaatgcagcacagagaggtgtagcaaaaatgaacctcaatgaaagcaaccaaaca
aaacattctccggtccaatcaggacaaacagaagcacaacatagaccaagcacagcacag
acggaggaaaaaaggcaggatactgttattctgattagtcaaaatgaagaaaacaaagag
ttagcggttagacttcagacagaccaggatatcgagagaaaccaggaagagatggcacag
aacccagagcttatgctggaactggactccattcagacagaaggggatgctacagagatc
actaagacttcaacacagcacatacctgggaatgaagctaagtttgcatcaaatatacaa
ggtgtagtaaagttcagaactcttaatgaggaacaaaacggggagaggtctgaagacaag
gatcaagacaaaataggtccaaatttgtaccaaagaccagtgaaaaatgaacagtttacc
ctgtttgtggttgataaactgttcctggccaccccaaatatagcagggcaaagtccaaat
aacatgctcagtgaccaaacagagatttcagagctaaacagatacagggacaaggaactc
caggaggatcctgattctgtagatttagaccccactgaggacacagggttaactatcagg
atccaggcccctgggaccgaggccaccgatttccaggcatctccattagcaatggtgcag
gaaatcaagcaagtgttgatggaccgtgaggagacctgttatcgtacctgtttctccttg
cagttagatgggaatacactggacaacttctctaatctgaaggccattagtggcctgcaa
gagggctcgcttttgaagatagtggaagagccatacacagttcgagaagttcgtttacac
cttcgtcacatcagagacctgctgaaaagcttggacctcacagacgcctataatggcatc
gagggaagctctttgtccttccttaggttcttcactgaagatcgtattgaaggtgagatg
caacagaaagaaaaagctgaagatgtgatgcaattcaattgtagccctcctgagtacatt
cttccagggactaaggaatgtttactgggacccctgcagcctcaaagtgagaacttaaag
tccatcgaatgcctgaaggtgctgatgaccagcaactggaaccctcctccaggaaacaga
aaaatacatggtgatctcatgtacctcaatgtccttaccatggaggacagacaattcagc
attacagcatcaacacgaggtttttacttgaatcaatctaccacttacaattttaacccg
aagccagaaaatcccagtatgcttagtcattccttagtggagcttctgaatcagatcagt
ccagtatttaaaaagaacttcagtcttttactcaagagaagaatatcgacacaccccttt
gagagaataggtacaccattacaggtgtttagctggactgctccaactctcgaccattcc
atggactgtgttcgagctgaagaggccagctcttcccaactgtactatgaaggacatgtg
cctggacaggtttgtgactggaatgaagagcttcagagcactagagagctaccgagtcag
agcctcagagatcgcctgctgagagacagagcaatcttcaaggttaacagtgattttgtg
agcactgctacacgaggtgcaatggcagtagtcgatggcaatgtgatgcccatcaacccc
agtgaggaaccacacaatcacatgtatgtgtggaacaatatcttctttagcttaggcgta
gacggacatgaacagtataaagaggtaggtggcgaggctgcagcctatgtcgcctcagcc
attgacctgaatggtgtgagagcatacagtgcactggatacagatggcctatacgtgctt
ggtacagtactggtggattatcgaggttaccgtatcactgcacagtcgattgtccctgga
attcttgaatgtgaccaggaacagagtgtgatctacggttccactgacttcggaaagact
gttgtctctaacgaacagttcctaaagttactggaaaaacccagcaagcatctgagagtg
cagcggcactttgtgcttaacaaagacgactccgctgtagagttgtgttcctcagtggaa
tgcaagggcatcgtgggtaacgatggccgtcattacattctcgacctgctgttcacattt
ccccctgacctcaatttcttgcctgtggaaggggaggaactaaacaccgagtgccaacaa
ctaggtttcccaatgcaacaccgacatcgcctggtctgtctgagacaagagctaattgag
gcatttgtgaagtataggcatcaattatacatgagtaccgaatctcaaagccttgatcaa
gaaagcaacagaataagagatgttgaattaccagacagtccagaggaagatgctttggat
ccaacaccggatgtttccagcaagcatgtagatattgacaagaacaattctctccatcgg
tctatgcattcgtcctcttctgatattcgtttcaaccctgacattttctcaccaggtgtt
cgattcccgaaagaatgtttgcaagatatccaggaacagaaacaacttttaaaggatacg
gcagctttccttgtgtcaacccaaatcccaaacttaattaagagctgtgtcgatcatacc
acaatgccgatggatggtttgaccttaactgaggctctccatcaaaatggtatcaacatc
cggtacctgggaatagtactggagtttattgagaaaagtcctcagaagacaaaactggac
catgtttatagaattgcactatgtgagttgatcactagatgtgcaaaacatacgttcagg
acctatttgttagctgtagagtcatcttccctgtctgtctcagtcagccatttcctcaac
tgcttcctcagctcctcgccggaggttctggggacccagcagatggacagattgtcatcc
aagcgcaggagtcggcggaggcggagtcgtggctcttcaagtggcaaagtgccaagtgta
ggaggcgcattaaccagcctgacctccagtgaactctggaggactatccaggctgaggct
caggagtattatcactacagcctgccgtgtgacagtatagagcaggcggtggacaaatgt
ggtttacaaagaatcaccctgctcagagagatctgtatcaaaacaggcatccagattcat
atcagagagtatcagtttgatggcaagcaaaggccggcgtttagcgaggaggacatcttg
aacattttccccgttataaagcacgtcatcccgaaagctaatgatgggatttattttctg
cactgcggccaagccagcatccagcagggaaacctgaaagaaggttgtgagctaatcagc
caagcattaagcttgttcactaatgtttatggggctctgcaccaggatgtctgcatctgt
ctgcgtctgctgggacgcatttattacatactcggagactatgctgaggcactgagtcac
cagcagaaagctgtactgatcagcgaaagagttctgggaatagaccatccgaacactata
caggaatataaacaccttggtctttattgctttgccggtggacagacgtctacggggttg
cgactgctctaccgcgcccgttacctcatgctgctggtgtgtggagaagatcatccagaa
atggctctactggatagtaagatcggtctcgtgttacatggcatgatgcagtgtgacctt
gcgcttaagtttctggagaatgccctggctttgacctccaaatatcaggggccgacctcg
ctaaaagtggcacaaggccgtcacttgttggcaaaggtgcatgagagcaaaggagatttc
cgctcggcgctgagacatgagaaggaacgttatgtgatttaccggagccaggttggagaa
gcacatgaaaagacacaagagagctctgagtacctgaagcacctcacgaatcaggctgta
cttctgcagaggactatgaacatgatatacgcaaaccgttctggatccagtattactcct
ctcactcttgcagctccaagtcggctctggattgtggagcagctaaatctggtcaatggc
attgtcctcatcccactcagcaacactgatcttgaaagtctaagggaccacccccaaaaa
acatcggcttga
DBGET
integrated database retrieval system
