Silurus meridionalis (southern catfish): 124398637
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Entry
124398637 CDS
T08004
Symbol
pou6f1
Name
(RefSeq) POU domain, class 6, transcription factor 1 isoform X1
KO
K09368
POU domain transcription factor, class 6
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124398637 (pou6f1)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
124398637 (pou6f1)
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Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124398637
NCBI-ProteinID:
XP_046724792
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Position
16:10095865..10114510
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AA seq
603 aa
AA seq
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MMDSEDIPANDAPLTVNEQVIVMSSHETIRVLEVEVDTAVPSPGTHVKNEAGPEEGRGKA
LELIEGATQDKQTPSNTIHTVSNEAAAPSVQNVPIPISLSLPHAQTSMPITIQACPQVLT
QDGLATLMTGMIAQQSTLNQPLLIPLSMAASVGGQNGLALLTLPTTTLATLPGFSAGGTA
GGLIKLPFGGLQAATVLNSVQPQFQAPAQTLLQPQAAALQSMQQTQAAITSTATVPSVMH
KATDPIASVATLQNTGLTINPAIISAASLGAQSQFISSLATSPIITNANVAGLTSQILTN
AQGQMISTLPVLVNPASLTGVSPTHSTPTQGLQVQTVAPQLLLNSQGQIIATIGSSPGAA
AFTTSTSSTALTKTTMSQTKVNTQVWHSELAPIVTVNQSPVMIAPQPSTGKSPSSSIPVA
CAEMPTVSQLVTKPQSGVTEDEGINLEEIREFAKNFKIRRLSLGLTQTQVGQALTATEGP
AYSQSAICRFEKLDITPKSAQKLKPVLERWLAEAELWNQKGQQNLMEFVGGEPSKKRKRR
TSFTPQAIEVLNSYFEKNALPTGQEITEIAKELNYDREVVRVWFCNRRQTLKNTSKINVF
QVQ
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgatggattcagaagacattcctgctaatgatgccccgcttactgtcaacgagcaggtg
attgtcatgtccagtcatgagaccattcgagttctagaggttgaggtggacactgctgtg
ccctccccaggaactcatgtgaaaaatgaggcaggaccggaagaggggagaggaaaagct
ttagagctaatagaaggggccactcaggataaacaaacaccatccaataccatccacaca
gtttccaatgaagctgcagccccttctgtacagaatgttccaattcctataagtctctct
ttgcctcacgctcagaccagcatgcccatcactatccaggcctgtccacaggttctgacc
caggatggacttgcgactctgatgactggcatgattgcccagcaaagcactctgaaccag
cctctgctgattccactaagtatggcagcctctgtgggtggacaaaatgggctggcactg
ctgacccttccaacaactacactagccactctaccaggtttcagtgctggtggtacagct
ggggggctcattaaactaccttttggtggcttgcaggctgccactgttttgaactcagtt
cagccacagtttcaggcacctgcacagacacttctacagccccaagcagctgcactacag
tcaatgcagcagactcaggctgctataaccagcactgccactgtaccttcagtcatgcat
aaggccactgatcctattgcatcagttgcaacacttcagaacacaggcctcaccatcaac
cctgctatcataagtgctgcatctttgggtgctcaatcacagttcattagttctctggct
acatctcccatcatcactaacgccaatgtggcaggacttaccagccagatcctcaccaat
gcacagggtcagatgatcagcactttgcctgtgttagtgaaccctgcatctctgacagga
gtgtcaccaacacattcaacaccaactcagggtctacaagtgcagactgtggctcctcag
ctgctgctgaactcccagggccaaataattgccaccatcgggagcagccctggtgctgct
gctttcaccacatccaccagctccacagccttgaccaaaactacaatgtcacagaccaag
gtcaacacacaggtgtggcacagtgaattggctcccattgtaacagtaaaccagtctcca
gtcatgattgctccacagccttccacaggaaaatcaccttcctcatcgattcctgttgca
tgtgcagaaatgcccacagtcagccaactcgtcaccaagccacagtctggggtgactgaa
gatgagggcattaatctggaggagatacgtgaatttgccaaaaactttaagattcggcga
ctttcattggggttgacacaaacacaagtgggccaagctcttacggctactgaaggaccg
gcttacagccagtctgcaatctgcaggtttgagaagcttgatataaccccgaagagtgct
cagaagctaaaaccagttctagagcgttggcttgctgaagcagagctctggaaccagaag
ggccagcaaaatctaatggaatttgtgggaggtgagccgtccaagaaacgcaaacgccgc
accagttttacaccacaagccattgaggtcctaaatagctattttgagaaaaatgcactt
ccaactggacaggagatcacagaaattgctaaggagctaaattatgacagagaggttgta
cgagtttggttttgtaaccgcagacagacactgaagaatacaagcaagatcaatgtgttc
caagtacagtaa
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