Silurus meridionalis (southern catfish): 124398672
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Entry
124398672 CDS
T08004
Symbol
pdlim1
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124398672 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124398672 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
124398672 (pdlim1)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
124398672
NCBI-ProteinID:
XP_046724867
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All DBs
Position
2:complement(14764492..14770496)
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AA seq
321 aa
AA seq
DB search
MPLRIVMQGPGPWGFRLVGGKDFEQPLTVSRVTPGSKAAQANLCIGDTIIAIDGEPTDGM
THLEAQNKIKGCVEEMVLSIDRSELKMWSPLVSEDGRXHPYKMNLSSDLQEVKQIGSAHN
RSALPFSSPSPKVVTSQYNNPAGLYSSDNIKNFNSTVGGAKTTVMSNESSIIPDLSKPVQ
PKSPIVVDSEVYKMLNENQESCEPPRQSASFKVLQEILETGDADKPSGFRSVKAPTTKIA
SSLGGTEKLSICDRCGSGIVGMFVKLRDQYRHPECYVCTDCGTNLKQKGHFFVEDKIYCE
KHARERVTPPEGYDVVTVFPK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgccattacggattgtcatgcagggtcctggaccttggggatttaggctggtcgggggt
aaagatttcgaacagccgctgactgtttcacgggtaacaccaggaagtaaagcagcccag
gccaacctctgtattggtgacacaattattgccattgatggggagcccactgatggaatg
actcacttggaagcccagaataagattaagggctgtgtggaagaaatggtcctctccata
gacagatcagaattaaaaatgtggtctccgcttgtctctgaagatggaagancgcatcca
tacaaaatgaatctgtcctcagatctgcaggaagtgaaacaaataggttctgctcacaac
aggagtgctctccccttcagttccccaagtcccaaagtggttacaagccagtataataat
ccagcaggcttgtactcttcagataacatcaagaactttaacagcactgttggtggtgcc
aagaccactgtgatgtccaacgaatcaagtattattccagatttgtccaaacctgtccag
ccaaaatcaccaattgtcgttgactcagaggtctataaaatgctgaatgagaaccaagaa
tcttgtgagcctccacgccagtctgcatcattcaaagttctgcaggagatccttgagact
ggtgatgctgacaaaccctctggatttagaagtgtgaaagcacccactacaaaaattgct
tcttcattgggtggtacagagaaactctccatctgtgacagatgtggctcagggattgtg
ggcatgtttgtcaaactacgagatcagtaccggcaccccgagtgctatgtctgcactgac
tgtggaacaaatttgaaacaaaaaggacacttttttgttgaggacaagatttactgtgag
aagcatgctcgtgaacgagtgacacctcctgagggttatgatgtcgtcactgtctttcca
aaataa
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