Silurus meridionalis (southern catfish): 124398674
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Entry
124398674 CDS
T08004
Name
(RefSeq) synaptosomal-associated protein 23-like
KO
K08508
synaptosomal-associated protein 23
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124398674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124398674
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124398674
Membrane trafficking [BR:
smeo04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-23
124398674
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124398674
Exosomal proteins of other body fluids (saliva and urine)
124398674
Exosomal proteins of colorectal cancer cells
124398674
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNAP-25
DUF5089
Use1
DUF4192
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
124398674
NCBI-ProteinID:
XP_046724866
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All DBs
Position
16:11053445..11058798
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AA seq
208 aa
AA seq
DB search
MADMSVEEITIRANQVTDESLESTRRMLQLAEESRETGTKTMVMLDQQGEQLRRVEQGMD
HINQDMRQAENNLTDLSKCCGLCVCPCDRVRSIQNDGRYKRTWGTGNDNGTDGDGSVVSS
QPTNQRNGQAATTASRPYIKRITEDAREDEMEENLGQVGSIIGNLKIMALDMGNEIDKQN
KTIDRANEKADMNKARIDDANQRANKLL
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatgtcagtggaagaaatcacaatcagagccaaccaagtgactgatgagtca
cttgagagcacgagacgcatgctgcagttggcagaggagagcagggagactggaactaaa
accatggtcatgttggatcagcagggggaacaactgcggcgtgtggagcagggcatggac
catatcaatcaggacatgagacaggcagagaataacctgactgacctgtcgaaatgctgt
ggcctgtgtgtctgtccctgcgatagagtgagatccattcagaacgatgggcggtacaag
cgtacttggggcactggaaatgacaatggcacagatggtgatggaagcgtggtttccagc
caacccaccaaccagcgcaatggccaagcggcaacaacagcttcccgtccctatataaag
agaatcacggaagatgcacgggaagatgagatggaggagaacctggggcaggtgggcagt
atcatcgggaatttgaagatcatggctctggacatgggcaatgagatcgacaaacagaac
aagaccattgaccgtgctaacgagaaggctgacatgaataaagctcgtattgatgatgcc
aaccaaagagctaataagcttctgtag
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