Silurus meridionalis (southern catfish): 124398683
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Entry
124398683 CDS
T08004
Name
(RefSeq) calcium-responsive transactivator-like isoform X1
KO
K15623
protein SSXT
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124398683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124398683
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124398683
GBAF(ncBAF) complex
124398683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
124398683
NCBI-ProteinID:
XP_046724887
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All DBs
Position
16:2850118..2865504
Genome browser
AA seq
386 aa
AA seq
DB search
MSVTFSSTRPRGKGEVTQQTIQKMLDENHYLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPNPGMSMGGSGMGGSSAGGSLHSQSNLNDSVTPSSLMQSQIS
NGSSHTPIQQQQQQQHSGPSTLSMSCGSSFAHSMPLSSSSQGTALYPPSRTNINLQNSQV
SMMHQQGSGPHYSSSGGQHYQGQQTMGMMGQSNQGNSMVSQRPVGSYRPAQQGSQYMGQE
EFYGEQYGHTPSSSEPVNQQYYPDGHGEYSYQQSTYGEQSYERSFEDSTQHYYEGGNPQY
SQQQSQYQQSSGQQQTFNQQQYQSQPGYSSQGQGYGPGQGTPSQYSQYQQGQSQQYSSFR
STQSTPGSQTQRSYTYEQGQYGNYQQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcacattttcatcaacacgaccgagaggaaaaggagaagtgacccagcagacc
atacagaagatgctggatgaaaatcactatttgatccagtgtattatggactatcagagc
aaagggaagactgcagagtgcacacagtatcagcagattttacacagaaacctggtttac
ttggccacaattgcagactccaaccaaaacatgcagtcgcttttacctgcgccaccgaac
cccgggatgagtatgggtggaagtgggatgggagggagcagtgcaggaggatcgctacac
tctcagagtaatctaaatgacagtgtgactccttcctcactaatgcagagtcagataagt
aacggctcgagtcacacccccatacagcagcagcagcaacaacaacattctggcccttcc
acgttgtccatgagctgcgggtcgagcttcgctcactcaatgcccctgtcctcatcgtca
cagggcacggcactgtacccgccctcccgcaccaacatcaacttacagaacagccaagtc
tctatgatgcatcagcaaggttcaggaccccattactcctcatctggaggtcagcactat
caggggcagcagaccatgggcatgatgggacaaagcaatcagggcaacagtatggtctca
caaaggcctgtcggaagctatcgtcctgctcagcaaggatcgcagtacatgggtcaggag
gagttctacggagagcagtatggacacactccgagctccagcgagcctgtaaaccagcag
tattacccagacggccacggtgaatactcatatcagcagtccacgtatggagagcagagt
tatgagagatctttcgaagattcaacacaacactattatgaaggcggaaaccctcagtat
agccaacagcagtcacaatatcaacagagctccggtcagcagcagacattcaaccaacag
cagtaccaatcacagccaggatacagcagccaagggcagggttatggtccaggacagggc
actccgtctcagtactctcagtatcagcaggggcagagtcagcagtattcctcatttcga
tccacacaatcaactcctggctctcaaacacagagatcttacacttacgaacagggtcag
tatggaaactatcagcagtaa
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