KEGG   Silurus meridionalis (southern catfish): 124398688
Entry
124398688         CDS       T08004                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124398688
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smeo03019]
    124398688
   03041 Spliceosome [BR:smeo03041]
    124398688
Messenger RNA biogenesis [BR:smeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     124398688
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     124398688
Spliceosome [BR:smeo03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    124398688
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_PARP14_1
Other DBs
NCBI-GeneID: 124398688
NCBI-ProteinID: XP_046724898
LinkDB
Position
16:13575268..13579103
AA seq 372 aa
MSKEGQPREPEQLRKLFIGGLSFETTDESLRSYFEQWGALTDCVVMRDPSSKRSRGFGFV
TYSSVEEVDEAMGARPHKVDGRLVEPKRAVSREDSSKPFAHTTVKKIFVGGIKEDTEESH
LRDYFEEFGKIEAVEIMIDHKTGNKRGFAFVTFDDHDAVDRIVIQKYHTINGHNSEVRKA
VSKQEMQNSSMNMRGRGGGNYGRYGNNDFGGGRDGFRDGFRDGFRGGRGYGDGYNNGFGG
DGGYGGGGSGYGGNRGGGGYGGGGGQGYGNGGGGYGGGGYGGGGGNGYDNYNSGNFGGGG
GSSGGGGGNYNDFGSYNSQQSSFGPVKGNFGGGGGRNGGPYGGGYGGSSGGGGGYGGGSG
GGYGGNSGGRRY
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgtcgaaagagggtcagcccagagaaccagagcagcttcggaagctgttcattggaggc
ctgagcttcgagacaacagacgagagcctgcgctcttactttgagcaatggggcgcgtta
accgactgtgtggttatgagagacccgagctccaagcgctccagagggtttggttttgtg
acgtactccagcgtggaggaagtggatgaagccatgggggcgcgtccccacaaagtagac
ggacgcctcgtagaacccaaacgggccgtgtccagagaggattcaagcaagcctttcgca
cacaccactgtgaaaaagatctttgtgggcggcattaaggaagatacggaggagagccat
ttacgggactactttgaggaattcggaaagatcgaagcagttgaaataatgatcgatcac
aagactgggaacaaaagaggcttcgcttttgttacgttcgacgaccacgatgctgtggat
cgcatcgttattcaaaaataccatacaataaatggtcacaattcagaagtgagaaaggca
gtgtccaaacaagagatgcagaattcatcaatgaatatgaggggacgtggaggtggaaac
tatggtcgatatggaaacaatgactttggaggaggcagagatggcttcagagacggtttc
agagatggtttcagaggtggtagaggatatggagatggctacaacaatggctttggagga
gatggtggctatggtggtggcggctctggctatggaggcaaccgtgggggtggtggatac
ggtggcggcggcggacaaggttatggaaacggcggtggaggatatggtgggggcggttac
ggtggcggcggcggcaatggttatgacaactataacagcggtaactttggtggtggtggt
ggtagcagcggtggtggtggcggcaactacaatgattttggaagctacaacagccagcag
tcaagctttggcccagtcaaaggaaattttggcggtggcggtggcagaaatggtggccca
tatggtggtggatatggtggtagctcaggaggaggtggaggttatggcggcggatccggt
ggaggctatggcggaaactctggaggcagacgatattaa

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