Silurus meridionalis (southern catfish): 124398723
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Entry
124398723 CDS
T08004
Symbol
srsf6a
Name
(RefSeq) serine and arginine rich splicing factor 6a
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03040
Spliceosome
smeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124398723 (srsf6a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124398723 (srsf6a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124398723 (srsf6a)
Spliceosome [BR:
smeo03041
]
Common components
Common spliceosomal components
SR proteins
124398723 (srsf6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
124398723
NCBI-ProteinID:
XP_046724957
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All DBs
Position
16:925156..931754
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AA seq
407 aa
AA seq
DB search
MPRVYIGRLSYHVREKDIQRFFSGYGKLLEVDLKNGYGFVEFEDTRDADDAVYELNGKEL
CGERVMVEHARGPRRDRDGYGGGGGGGGGGGGGGGGGGGGGGGGGYYGGGRSGYSSRSRS
GRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERANEGVIEFRSHS
DLRRALEKLDGTDINGRKIRLIEDKPRRRRSYSGSRSRSRSHRRSRSRSHRSSRSRSNSR
SRSRSRSRRHRSRSRSHDKSRSRSGRKSRSKSPSSKSRSRKSRSRSRTQKSRSRSRSRSG
NRQSRSKSTSKVKSERGGSRGGSRGGSPGGSRGGSRDRSKEKSTSKKSRSRSASPMENGN
DERAKSASRSPSPPVGKSGSKSPERRSRSRSKSGSRSKSRSRSASQD
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcgtctacatcggccgtctgagttaccacgtccgcgaaaaggacatacagcgc
ttcttcagcggatacgggaagctgctcgaggtcgacctgaaaaatgggtacggctttgtg
gagtttgaggacacgcgtgacgcggacgacgccgtgtacgagctgaatgggaaggagctg
tgtggcgagagggtgatggtggaacatgccagaggacctcgacgtgaccgggatggatat
ggaggaggaggtggtggaggtggaggtggtggtggaggaggaggaggaggtggtggtgga
ggaggaggaggaggttattacggaggaggccgcagtggctacagcagcaggagtcgctct
ggccgtgataaatatggccctccggtccgcaccgagtaccggctgatcgtggagaacctt
tccagccgctgcagctggcaggacctcaaggacttcatgaggcaggcgggtgaggtgacg
tatgctgatgctcataaagaacgagccaacgagggtgtgatcgagttccgctctcactca
gacctgcgcagggctctggagaaactggatggaactgacattaatggcaggaagatccga
ctgatcgaggacaagccgcgccgccgccgctcgtactccgggagtcgctccaggtcccgc
agtcaccggcgttcccgcagcaggagccaccggagcagccgatcccgaagcaactccagg
tctcgctcaaggtctcgttcccgccggcacagatctcgttccagatcccatgacaagtcc
cgctccaggtcgggtcgcaagtcccgctccaaatctccgtccagcaaatcccgctctcgc
aaatcccgctcacgctctcgcacgcagaaatcccgcagcaggtctcgctctcgctcgggc
aatcgccagtcgcgctccaagagcacttccaaagtgaaatcggagcgcggcgggtctcgg
ggcgggtctcggggtgggtccccgggtgggtctcggggcgggtctcgtgaccgatcaaaa
gagaaatccacgagtaagaaatcgcgtagtcgctcagcatcacccatggaaaacggaaac
gatgagagagccaaatccgcctcgcgctcgccgtctcctccggtagggaagagcggctca
aagtctccggaacgtcgctcacgctcccgatccaaatctggctcccgctctaaatcccgt
tccagatccgcctctcaggactaa
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