Silurus meridionalis (southern catfish): 124398747
Help
Entry
124398747 CDS
T08004
Symbol
syde2
Name
(RefSeq) rho GTPase-activating protein SYDE2 isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124398747 (syde2)
Membrane trafficking [BR:
smeo04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
124398747 (syde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
124398747
NCBI-ProteinID:
XP_046725011
LinkDB
All DBs
Position
16:16240062..16270593
Genome browser
AA seq
1326 aa
AA seq
DB search
MNKEKHLEVDECLAEPGGTKMDRSHSPNLFQYIHSGHVNEHDLIRVIESSLELGEDLSMP
SLQSPTFFPTELEIVDADMAPHLVCAREGMNRHNSIDSEDDDYYDNEILPFYESGSLNKE
SNDIEEPSRTLQSEQIVDSSAQETDRLRTQLKEAYYLLINAMDGIAFDAEVQTNCYVEQR
NSSSQSPDSLSMSSDSSTRELSRSSEEHDVHHWTLLSPGECTAADRGSSQRSKSLQNLLQ
AQVRPVFQRSLSDGEVQYPVRASQGDPRSEKRSAPQNTSVNTPPLANRGNLDLDTAMVPE
QADEENSAYISHQDSSDGVPLRPSDPLCLQQMNLSRHAGTSVGKPPRVTVNKMQEWMHKG
RLLSSEMRQRIAGSSSHGAAQERHGNELQSSSKTFSQDNNMNGEKTGMVNASSGQHSVPV
IENRDNCTRPVPLNSITVSKKRNWLNQSSMRPSPTSDEDDHTHPSQSHTHTQPQTCSRPR
VPVSDPVEENDADDEGEIWYNPIPEDEEDLHHGEYGERVSRKMSGEEGGRVSTTARASGN
LNASHSSEQKHVYREKCRSQEEKPTIKTTEFPEQSVSGFSPPSSPNPAKKSCSINWSLPE
RIKSPRTVRKLSIKMKKLPELSKKLSAKGQTIGQTETRNHLPRASGPADLGSGVLSTAST
SGNVIWRYHLDSSVCTQQQKKSSGLGAPKSAIKGGYLSDGDSPELVAKSAKHGSCSKSHQ
KAQEKDSFFNSGVSKLADVASFRPYSLPEQAKCTSSSAAAAPVSGLLSVHLCGAEGLKTP
RSDESRHIYCAIQVDETKRARTALLPCHADFLAMDHTFQLELEEAQRLRLVLFGCEATTA
PRRQRVCCHGAVLLAPLFRTANAGRAHRLAVRLEPRGVIYVKLGLTERRQSLTEGNEAEK
ERQREVFGVDAARVVEREATGLMVPLIIEKSIGEIERRGCQVVGLYRLCGSAAVKKELRE
AFERDSHAVELSESNYPDINVITGVLKDYLRELPHPLISKPLYEAVLDAMSKRPLLMGSG
SCENDPLDSDHAAGLLETLPEIEKTTLRKLLDHLKRVALHHEVNKMTCQNLAVCFGPVLL
SQRQDASGLANRVFMDSEELASALHFKKHIEVLHYLLQLWPVADVQSKPSSTAMDPTKPL
APVRRRKERPQVLNLSDAELAGVLRPRPGRLDSPSNRYAGDWSDCKKTYLHQMHTEEEEE
ADYADVPSEEEKDKERVNEEKETLESGNDVEIEVENEQKSDVQEELFVEERQENEDTPLL
KSYGRMLVEQEEHRAKEHTYQAFMKIQEISPVLSNRVNLRDLQESIDVLIGNLERELNKN
KLNVGY
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagaaaaacacctggaggtggatgaatgtcttgcagaacctggcggaaccaaa
atggaccgttcgcattctcctaaccttttccagtatatccattctggacatgttaacgaa
cacgacctgatccgggttattgaaagttctttagagcttggtgaagatctcagcatgcct
tctctgcagagtccgaccttcttccccaccgagctggagatagtagatgcagacatggct
cctcacctggtgtgtgcacgagaaggcatgaatcggcacaattccatcgacagcgaggac
gacgactattatgataacgaaatcttgccattttacgagtccggctccttgaacaaagag
tcgaacgacattgaagaaccatccagaactttgcagtcggagcagattgtcgactccagt
gctcaggagacggaccgactcaggactcaactcaaagaagcctactacctcctgataaat
gccatggatggcatcgctttcgatgccgaggtgcaaacgaattgctacgtagaacaaagg
aacagctcaagtcagtctcctgatagcctgagcatgagttcggattcttccacgagagag
ctctcacggtcctctgaagaacatgatgtccaccattggacacttctgagtcctggagaa
tgcactgctgctgaccgtgggagttctcagaggagtaaaagtttgcagaatcttctccag
gcccaagtgaggcctgtttttcagcgctctttgagcgatggtgaagtccagtatcctgtg
cgggcaagccaaggtgatccacgctccgaaaagagaagtgctcctcaaaacacttctgta
aatacgcctccattggcaaaccggggaaacctggatttagacacagccatggttccagag
caggcagatgaggagaacagtgcctatattagtcaccaggattcttcagatggagttccc
ctcagaccatctgacccgttgtgcttgcagcagatgaatcttagcaggcatgctggaacg
agtgttggaaaacctcctcgggtcactgtgaacaagatgcaggaatggatgcacaaaggc
cgcttgctttcctcagagatgaggcagaggattgctggatcctcttcgcatggagcagct
caggagcgccatggaaatgagcttcaatcttcctccaaaaccttcagccaggacaacaac
atgaatggagaaaaaacaggaatggtgaatgcatcaagtgggcagcactcagtccctgtg
atagagaaccgtgataactgcactcgtccagttcctctaaactccatcactgtctccaaa
aaacgtaattggctgaatcagagctccatgcgaccctcaccaacctccgacgaggatgac
cacacgcacccatcacaatcacacactcacactcaaccacaaacttgttcccgaccacgt
gtccccgtctccgaccctgtcgaggagaacgacgcagatgacgagggtgagatctggtac
aacccgattcctgaggatgaggaggatctccatcacggcgagtacggagagagagtgtcg
aggaagatgagtggtgaggaagggggcagagtctctactactgcgagggcttctgggaac
ttgaatgccagtcattccagtgagcagaaacatgtgtacagagagaaatgcagatcacag
gaggagaaaccaacaatcaagactacagaattcccggagcaaagtgtatctggtttctct
cctccctccagtccaaacccggctaagaagagctgctccatcaactggtctttaccagag
cgcatcaaatctccacgcacagttcgcaaactttcgataaagatgaagaagctccctgag
ctcagcaagaagctcagtgctaaaggacaaactattggacaaacagaaactaggaaccac
ctgccaagagccagtggtccagccgatctgggctcaggggtcctgtccacggcgtccacg
agtggcaacgtgatctggcgctatcacctggacagcagtgtttgcacgcagcaacagaag
aagagcagtggattaggtgcacctaaatcagccataaagggcgggtacttgagcgacggg
gactcgccagaactagtcgccaaatcggctaagcacggctcatgttcgaaatctcaccag
aaagcgcaggaaaaggattcattttttaattcaggcgtctccaagttagctgacgtggct
tctttccgtccgtacagcttgccagaacaggcaaagtgtacttcctcatcagcagcagca
gctcctgtgtcaggtctcctgagcgtacacttgtgcggcgccgagggtctaaagacgcca
cggagcgatgaatcgcgtcacatctactgcgctattcaagtcgacgagacaaagcgagca
cgcacggctctgcttccctgccatgctgactttctcgccatggaccacactttccaactg
gagctggaggaagctcagcgcctccgcctcgtcctcttcggctgcgaggcgaccacagcg
ccgaggaggcagcgagtgtgttgccacggagccgtattgctggcgccgctcttcaggacg
gcaaatgccggacgtgcccacaggcttgcagtgcgcctcgagccacggggagtcatctac
gtcaaactgggattgacggaacggcggcagagcttgaccgaagggaacgaggctgagaaa
gagcgacagagggaggtattcggagtggacgcggcacgagtggtggagcgcgaggccaca
gggctcatggtacccctcatcattgaaaagtccattggcgagattgaaaggagaggatgt
caggtggtaggactgtatcgtttgtgcggctcagccgccgtcaagaaggagctgagggag
gcgtttgagagagacagccacgccgtcgagctgtcagagagcaactaccccgacatcaat
gtcattacaggtgttctgaaagactatctgagggagcttcctcatcctctcatctctaaa
cctctgtatgaggcggttctagacgccatgtccaagcgaccgctgctgatgggaagcggc
agctgtgagaacgacccgctcgactcggaccatgccgcgggattgctcgaaacgctgccg
gagatcgagaagacgactctaaggaaacttctggaccacctgaagcgtgtcgcgttgcat
cacgaggtgaacaagatgacgtgccagaacctggctgtgtgtttcggacccgtgctgctc
agtcagagacaggatgcttcgggtctcgctaaccgagtgttcatggactcggaggagcta
gccagcgcgctgcactttaaaaaacacatcgaggttctgcactatctgctgcagctgtgg
ccagttgcagatgtccagagcaaaccttcatctactgccatggaccccacgaaacctctg
gccccggtgaggagaagaaaagagcgcccccaagtgttaaacctgagcgacgccgagcta
gcaggagttctgcgtccccgtcccgggcgcctggacagtccgagcaaccgctacgccgga
gactggagcgactgcaagaagacgtaccttcaccagatgcatacagaggaggaagaggaa
gccgactacgccgacgttccaagcgaagaggagaaggacaaagaacgggtgaacgaggag
aaagaaacgctcgaaagtggaaacgacgtcgaaatagaagtggagaacgagcaaaagagc
gacgttcaggaagaactttttgtcgaggaacgacaagagaacgaggacacgccgttgtta
aagtcgtacggtcggatgctagtggagcaggaagagcaccgagccaaagagcacacgtat
caggcgtttatgaagatccaggagatcagccctgttctaagcaacagggtgaacctgcga
gatctacaggagagcattgacgttctcatcggcaacctggagcgagagctgaacaagaac
aagctcaatgtcgggtattaa
DBGET
integrated database retrieval system
