Silurus meridionalis (southern catfish): 124398779
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Entry
124398779 CDS
T08004
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124398779 (tfip11)
Spliceosome [BR:
smeo03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
124398779 (tfip11)
Other components
Complex C specific factors
124398779 (tfip11)
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
124398779
NCBI-ProteinID:
XP_046725073
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Position
16:complement(8546848..8553134)
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AA seq
838 aa
AA seq
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MSMSHLYGRRGDDENEDGVEIEKFEISEWDLANEFNPDRRRHRQTKEEATYGIWAEHDSD
DERPSFGGKRAKDYTAPVNFVSGGLRKTAAEEEREQHDLDDSDEDGEAAAPPPPPRATAP
RKLQTGGNFKTSQKTFAGNIRPGQDIGTWEKHTRGIGQKLLQKMGYIPGKGLGKNAQGIV
NPIEAKVRKGKGAVGAYGTERTQQSIQDFPVVDSEEEEEKEFQRELGQWRKEPGAGKKKP
KYSFKSVEELKAHGKISNKNMCQPAGELAQVKVIDMTGREQKVYYSYSQMSQKHSIPEEA
PMSASAQMQKSSGFALPELEHNLKLLIELTEQDILQSCRRLQHERDTVVSLQHESTTLQE
RLCEESQAVERLEQVLELVERLETAGEGGNPPLSLEEGVQVFQQMQTHFYNEYKSMGLAD
LAVSVVHPLLNEKLRNWDPLKDCSYGLEEVGQWRAILEGTQLQHSVPDSNHMDPYHRLIW
EVWVPVLRNCVAQWQPRNVGPMVDLVDCWAPVLPIWILDYVLEQLIFPRLQKEVDNWNPL
TDTVPIHSWIHPWLPQMQMRLEPLYPPIRNKLANALQRWHPNDASARLILQPWKEVFTPG
AWEAFMVKNIVPKLALCLGELVVNPHQQLIDPFNWVMDWEGMLSLSSMVGLLDKHFFNKW
LQVLCSWLSNNPNYEEITKWYLGWKGMLSEQLLSQPLIKEKLNEALDIMNRAVASGLGGY
MQPGAKENIAYLTQTERRKDFQYEPPAAPQREAESSVPRLPVTGPISASMPTNFKDLIQA
KAEENGIVFMPLVGKRHMGKQLYTFGRIIIYVERGVVFVQGKKTWVPTSLQSLIDMAK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcccatctgtatgggcgaaggggagacgatgaaaatgaggacggagtcgaa
atcgagaagtttgagatttctgaatgggacttggctaatgagtttaatccagacagacgt
cgtcataggcagaccaaagaggaggctacatatggtatatgggctgaacatgattcagac
gatgagagaccgagctttggaggcaagagagcaaaagactacacggcacccgtgaacttt
gtaagtggcggtctgaggaagactgcggctgaggaggaaagggagcaacatgacttggat
gactctgatgaagatggagaagcagcagcaccaccaccaccacctcgtgctacggcaccc
agaaagttgcaaacgggtgggaattttaaaacctcccagaagacatttgcaggcaatatc
cgaccaggacaggacattggtacctgggaaaaacacacacgaggaattggccagaaactt
ctacagaagatgggctacatcccgggaaaaggcctcgggaaaaatgcacagggtattgta
aacccaattgaggctaaagtacgtaagggaaaaggagcagtgggggcttatgggactgag
aggactcagcagtcaattcaggactttccagttgtggactcagaggaagaagaagagaag
gagtttcagagggaattagggcaatggaggaaggagcctggggcaggaaagaaaaagcct
aaatactccttcaaatctgtggaggaactcaaagctcatggaaaaatctccaacaaaaac
atgtgccaaccagctggagaactagcacaagtcaaggtaatagatatgacgggccgggag
cagaaggtctactacagttacagtcagatgagtcaaaagcacagcattcctgaggaggct
ccgatgagtgcaagtgcacaaatgcagaaaagctccggatttgctctgcctgaactcgaa
cacaacctcaagctgctcatcgagctcactgagcaggatattctacagagctgtcggcgt
cttcagcatgagagggacacagtggtgtctctacagcatgaaagcacgactttgcaggaa
cggctatgtgaggaaagtcaagcagtggagcgactagagcaggtgctggagctagtggag
cgtctggaaacagctggagaaggaggcaaccctccactctctctcgaagagggcgtccag
gtcttccagcagatgcagacgcacttctacaatgagtacaagagcatggggctggccgat
ctcgccgtttctgtggtgcatccactactgaatgagaaacttagaaactgggacccactg
aaggactgttcatatggtttagaggaggtaggtcagtggcgggccattctagagggtaca
caacttcaacatagtgtacctgactccaaccatatggacccttaccacaggttgatatgg
gaagtctgggttccagtgctgaggaactgtgtggcacagtggcagcccagaaatgttggt
ccaatggtggatcttgtggattgctgggcccctgtgcttcctatctggatcctcgactac
gtgctggagcagctaatctttccacggctacagaaagaggttgataactggaacccactg
acagacacggtacccatccattcatggatccatccatggttgcctcagatgcagatgcgc
ttagagccactgtacccacctatacgcaacaagttagcaaacgctctacagcgctggcac
cccaacgacgcttcagcccgactcatcctgcaaccttggaaagaagtcttcacccctgga
gcctgggaggccttcatggtcaaaaacattgttcctaagttggctctctgtctaggggag
ctggtggtgaacccacatcagcagctgattgacccgttcaactgggtgatggactgggaa
ggcatgctgtctctctccagtatggtcggattacttgacaagcacttttttaacaaatgg
ctacaggtgttgtgttcttggctgagtaacaatcctaactatgaggagatcactaagtgg
tatctgggatggaagggcatgctgtcagagcaactgctcagtcagcctcttataaaagag
aagctgaacgaagctttggacattatgaacagagctgtagcctctggactcgggggctac
atgcagccaggagcaaaagaaaacattgcatatctgacccagacagaaaggaggaaagat
ttccaatacgaaccaccagcagcaccgcagcgtgaggcagaaagcagcgttccacgcctg
cctgtcactggccctatttcagcctctatgcccaccaactttaaagacctgatccaggcc
aaagcagaagaaaatggcattgttttcatgcctttagtaggcaagcggcacatgggcaag
caactgtatacatttggcagaatcattatctatgtggagagaggtgttgtgttcgtccag
gggaaaaagacctgggtccctacatcactacagagtctcattgatatggccaaataa
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