Silurus meridionalis (southern catfish): 124398844
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Entry
124398844 CDS
T08004
Symbol
acap3a
Name
(RefSeq) LOW QUALITY PROTEIN: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124398844 (acap3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124398844 (acap3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124398844 (acap3a)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
124398844 (acap3a)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
124398844 (acap3a)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124398844 (acap3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_3
Ank_5
BAR
PH_11
ANK_LRRK2
PH_21
Motif
Other DBs
NCBI-GeneID:
124398844
NCBI-ProteinID:
XP_046725249
LinkDB
All DBs
Position
16:complement(13830382..13879214)
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AA seq
837 aa
AA seq
DB search
MTVDFEDCLKDSPRFRANIDEVETEVVEIEAKLDKLVKLCSGMIEAGKAYVSANKLFVNG
IRDLSHQCKKDQMISECLEKCGESLQEIVNYHMILFDQAQRSVKQQLHNFVKEDVRKFKE
XRKALDRVREDLEITQVKNAQAPRNKPHEVEEATSSLNITRKCYRHLALDYVLQINVLQA
KKKFEILDAMLSFMHAQYSLFQQGFNLLNEIDPYMKKLAAELDQLVIDSAMEKRDMEHKH
ATIQQRTLLQDFAYNDQKVEFNLDAPNGVVMEGYLFKRSSNAFKTWNRRWFSIQNSQLVY
QKKLKDSLTVVVEDLRLCSVKPFEDIERRFCFEVVSPFKSCMLQAESEKLRQAWIQAVQA
SIASAYRESPDSYCTERLDRTASPSTSSIDSASEPRERSLRAESVLQRVQCVPGNGVCCD
CGQADPTWASINLGILLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMCDLGNSVIN
HIYEGTCEEQGMKKPGANGTRQDKEAWIRAKYVEKRFLKKMATAEALANSERKSERRWAT
KKCRRHNSAATVPKHRRKYRQNPGSATTALERKFRRDSLFCPDELDSLFSYFDNGSGPRS
PAGLSSDSGLGGSSDGSTDVLLFGSVVGSVTEEECEASEESSGEVEPEPEASDPEDVREL
HPGALLYKACKARNLPVMAEALAHGADVNSANDEDEGKSPLIQAVIGGSLIACEFLLQNG
ANVNQIDLKGRGPLHHATYLGHTGQVCLFLKRGATQNDGDDDGQDPLSIAVQAANADIVT
LLRLARMNEEMRESEGPLGQPGDTTYLDIFREFSHMASHNPEKLKRRSIHFRHSFRV
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggattttgaagactgcctcaaagattcaccccgttttagggcgaatatcgac
gaggtagagactgaagtggtggagattgaagcgaagctggacaagttggtgaagttatgc
agtgggatgatcgaagcggggaaggcgtacgtcagcgccaacaagctgttcgtcaacggc
atccgggacctgtctcaccagtgcaagaaggaccaaatgatatcagaatgtctggagaag
tgcggcgagagtctgcaggagatcgtgaactaccacatgatcctgtttgaccaggcacag
agatccgtcaagcagcagctgcacaattttgtcaaagaggatgtgcgaaagttcaaggaa
nnacgaaaagcacttgatcgggtgcgtgaggatctggagatcactcaggtgaagaacgct
caggcgcccaggaacaagccgcacgaggtggaggaggccaccagctccctcaacatcacc
cgcaagtgctaccgccacctagcacttgactacgttctgcagatcaacgttcttcaggcc
aaaaagaaattcgagattctagacgcaatgttgtcgttcatgcacgcacagtactcgctc
ttccagcaggggttcaacctgctcaatgagatcgacccttacatgaagaagctggcagcc
gagctggaccagctggtgatcgattcagcgatggagaaaagagacatggagcacaaacac
gcaacgatacaacagcggactcttctacaggactttgcctacaacgaccagaaggtggag
ttcaacctggatgcccccaatggcgtagtgatggagggctacctgttcaaacggtccagt
aacgcctttaaaacgtggaacaggcggtggttctccattcagaacagtcagctggtgtat
cagaagaagttgaaggactcactgactgtagtagtagaagacctgagactgtgttcagtc
aaaccctttgaggacatcgagagacgcttctgctttgaagtggtgtctccgttcaagagc
tgtatgctgcaggctgagtctgagaaactccgccaagcctggatccaagcagtgcaggcc
agcattgcctcggcctatagagagagtccagacagctactgcaccgagcgcctggaccgc
acggcgtctccctctaccagcagcatcgactcggcgagtgagcctcgagagcgcagccta
cgggccgagagcgtgctgcagagggtgcagtgtgtcccgggcaacggcgtgtgctgtgat
tgcggtcaagccgatccaacctgggccagcatcaacttaggaatcctgctctgtattgag
tgctccggcatacaccggagtttgggagtgcactgctccaaagtccggtctctcactctg
gactcttgggaacctgaactactcaagttgatgtgtgatctgggtaacagtgttataaac
cacatttacgagggcacgtgcgaggagcagggcatgaagaaaccaggagcaaacggcacc
aggcaagacaaagaggcatggattcgagccaagtatgtcgagaagaggttcctgaaaaag
atggcgacggcagaggccctggccaacagcgagaggaaatcggaaaggcggtgggcgacg
aaaaagtgccgacgccacaacagcgccgccaccgtgcccaaacaccggcggaaatacaga
cagaatcccggctcagccaccacagcgctggagagaaagtttcggcgagattcgctcttc
tgtcctgacgaactagactctttgttctcctactttgacaacggctcagggcctcgcagt
cccgcaggtctcagcagtgacagcggtctgggaggcagcagtgacggcagcaccgacgtc
cttctgtttggctcggtggtgggcagcgtcactgaggaggagtgtgaagcgtctgaggag
tcgagtggtgaggtggagccggagccggaggcgtcagacccagaggatgtgcgtgagctg
catcctggtgcgctgctctataaagcctgcaaggctcgtaacctgcccgtcatggccgaa
gcactggcacacggcgctgacgttaactctgccaacgacgaggacgagggcaagagccca
ctcatacaggccgtgatcggaggttctttaatagcctgcgagttcctgctacaaaacgga
gcaaacgtcaaccaaatagacctgaaaggacgagggccgttacaccatgctacgtattta
gggcacacggggcaggtgtgtttgttcctgaaacgtggagccacacagaacgacggcgac
gacgacggtcaggatcctctcagcattgcggtgcaggcggccaacgccgacatcgtcact
ctgctacgtctggctcggatgaacgaggagatgagggagtccgaggggccgttggggcaa
ccaggtgacaccacgtacctggatatcttccgtgagttttctcacatggcgtctcacaac
cccgagaagctgaaacgcaggagcattcacttccgccactcctttagagtttga
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