Silurus meridionalis (southern catfish): 124398861
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Entry
124398861 CDS
T08004
Symbol
l1camb
Name
(RefSeq) neural cell adhesion molecule L1.1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124398861 (l1camb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124398861 (l1camb)
04090 CD molecules [BR:
smeo04090
]
124398861 (l1camb)
04091 Lectins [BR:
smeo04091
]
124398861 (l1camb)
Cell adhesion molecules [BR:
smeo04515
]
Immunoglobulin superfamily
L1 family
124398861 (l1camb)
CD molecules [BR:
smeo04090
]
Proteins
124398861 (l1camb)
Lectins [BR:
smeo04091
]
I-type lectins (Siglecs)
124398861 (l1camb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_6
fn3_2
DUF4064
Motif
Other DBs
NCBI-GeneID:
124398861
NCBI-ProteinID:
XP_046725272
LinkDB
All DBs
Position
16:3199675..3256032
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AA seq
1292 aa
AA seq
DB search
MSRAHCHSSAPGGKCKTQLLFLLLWFGETFASIQIPKEYNISDLKEPPLITKQSQSYTAF
YLDDISLRCEASGNPKPSFRWVKDGELFMEDKNGSGVLTADDKEELKFYQGKYRCYASNE
LGTAESGLIDLMTEPIPVSVKEKRVVKTVNEGESVVLQCNIPNSTVNAYIHWMDRKLMHI
KQSNRITIGLNGNLYFANALISNTRDDYTCYTQYVEARTILSTEPVSLIVNPSNAVVNRP
PALHQPKGSHTHFSALRGQNLILECIPYGLPTPLVKWERKDAPLSSSQATLDRFDRWLEF
SSISESDDGEYTCTASNPLGNVTHSYTVTVEAAPYWTKQPESAIYGPGETVRLDCHAEGI
PTPHIAWKINGVPISDTIAEERRTEKGGTLILSDVEKGDTAVYQCEASNKHGTASLNTYI
NVVVLPPQILTDDRRVYRLTEGSMASLICNSFGSPRPHISWFFRENETSVSVLSNERMFE
MTNGTLHITSVSHEDAGEYECSVKGSNISITALLVVLNKTQISSPLRDFRILRGSSLVWP
CRYEVDAELSKPLIQWRKDGHKITSAPDDKYTVFENGSLRITDIHAEDAGLYTCEVITRL
DFAKATGSLIVIDKPEPPHSLKLDEKENRSITLSWSPGFDNNSPVSEFVIEMREDLHLSK
GTWKELKRVPAEIGHLEIPLLPYCSYHFKVSAVNEIGASKFSVPSEPYTTPSAAPDITPV
NVRSESINPDSMVITWEELDQRHFNGPGFGYKVLWREAAGPDEPWQSAFVSHPPFTVNNT
GTFVPFEIKVQAANGVGDGPSPEAAIGYSGEDVPQKAPTQIIVSLFNATTASVRWDPVSR
ESVRGHLLGYKISLRRLGSRGDHLHQKKKKRALATVKEMVQDMEQVMEIEEERREIVVEG
RNEAIVAGLDFYSDYELSVAAYNSKGEGPMSLPTVFSTSEGAPGRVSNLRYESPSETEIT
LFWKKPHKTNGILRGYILLYQKFLKNGTSILQAIQVDPKETQYKIHDLDSKNFYIFTLKA
FTVAGEGESTHVNATTLLDGVPPTTVNATVGETSVNLSWVQGERYRNIGFTIHYLGKGGQ
WEESEQVNLTQTFYQLQGLKAGTPYRLEIRHNNITYWTQDLQTNGPDVDKVQSSFATEGW
FIGLISAIVLLLLLLLILCFIKKSKGGKYSVKDKEEGQMDSDAKPMKDEAFGEYRSLESS
DNDEKRSFSQRSLCPDLKRESDDSLVEYGDSVDIQFNEDGSFIGQYSGRRDTQPYPHGEQ
ESSGVPSPTNPNMHPPPSGSFPTSVTGILGGN
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtgcacactgtcactcatcagcccctggagggaaatgcaaaacccagctgctg
tttcttcttctctggttcggggaaacttttgcatccattcaaatccctaaagaatataac
atatctgacctgaaagagcctccattgatcacaaaacagtcacaatcgtacacagccttc
tacttagatgacatctctctgcggtgtgaagccagcggcaaccccaaacccagttttcga
tgggtaaaggacggtgaactgttcatggaggataagaacggctctggagttctcacagct
gacgacaaagaagagctgaaattttaccaggggaaatatcgctgctacgcatcaaacgaa
ctcgggacagccgagtcaggtctcatagacctcatgaccgagcccatacctgtgtcagtg
aaagagaagagagtggtgaagactgtcaacgagggcgaaagtgtggtgcttcaatgtaat
attccgaacagcacagtgaatgcttacattcactggatggacaggaaattgatgcatatc
aagcagagtaaccgcatcaccattggcctgaatggcaatctgtatttcgccaatgcgctg
atcagcaacactagagacgattacacctgctacacccagtacgtcgaggccagaaccatt
ttatccacagagccggtctctctcattgttaacccctccaatgcagtagtaaacagacct
ccagctctccaccaacccaagggctcgcacactcatttttccgctctccgaggccagaat
ctcatcctggagtgtattccgtacggcctgccgactcctttggttaaatgggaaaggaaa
gacgctccgctttcctccagtcaagctactttggatcgctttgaccgctggctggagttc
tcttctatctcagagagtgatgatggagagtacacctgcacggcttctaatccactggga
aatgtaacacactcctatacggttactgtggaggctgctccctattggactaagcagcct
gagagcgctatatatggcccaggagagacggtcagactggactgccacgctgagggcatt
cccacaccacacattgcatggaagattaatggagttcccatctccgatacgattgcggag
gagagacggactgaaaaaggtgggactttaatcctgagtgatgtggagaagggggacacg
gccgtctatcagtgtgaggcctccaataaacacggcacggccagccttaacacctacatc
aacgtcgtcgtcctgccccctcagattctgactgatgacagacgagtgtatcggttgaca
gagggatccatggcgtctctcatctgcaactcctttggttctccacggccccacatcagc
tggttcttcagggagaatgaaacgagtgtctcagtcctgtctaacgagaggatgtttgag
atgaccaacggtacgttacacatcaccagtgtgagccacgaagatgcaggagagtacgag
tgttcagtcaaaggctccaacatctccatcactgcacttctggtggtgctgaacaagact
cagatctcatctcctctgcgtgattttcggatattgcgcggatcttcgttggtttggccc
tgcaggtacgaggtggacgctgagctctccaagcctttaatccagtggaggaaagatgga
cataaaatcacatcagctccagatgacaaatacacagtttttgaaaatggatcattaagg
attactgacatccatgctgaagatgctggactctacacatgtgaggtcattacaaggctg
gactttgctaaggccactggatcactgatcgtgattgataagcctgaacctcctcactca
ctgaagctggacgagaaggagaatcgcagcatcactctgtcctggagtcccggatttgac
aacaacagccctgtgtctgagtttgtgattgaaatgagagaagatctgcacttatcgaaa
ggaacctggaaggagctgaagcgtgttcctgccgaaatcggtcacctggagattcctcta
cttccttactgctcgtatcacttcaaagtttcggcggttaatgagatcggcgcgagcaag
tttagcgtcccttccgagccgtacaccacaccttctgcagcacctgacatcaccccggtg
aacgtgagaagcgaatcaattaatccagacagcatggtcatcacatgggaggagctggat
caaaggcactttaatggccctggttttgggtataaagtgctttggcgtgaagcagccggc
cctgatgagccatggcagtctgcttttgtttcccatcctccatttacagtcaacaacacg
ggtaccttcgtgccctttgaaatcaaagtgcaggcggcaaacggggttggagatggaccg
agtccagaggctgccatcggttactcgggagaagacgttccccagaaggcgccgactcaa
ataatagtgtctctgtttaatgctacaactgcatcagtcaggtgggatccggtcagtaga
gagtcggtgcgtggacatctgcttggctacaagatttctctgaggaggctggggtccaga
ggagaccatttacatcaaaagaaaaagaagcgagcgcttgctacggtaaaagagatggtt
caagacatggaacaagtgatggagattgaggaggaaaggcgagaaattgttgtcgaggga
agaaatgaggcgatcgtggctggcttggacttctactccgattatgagctctcagtcgcc
gcctacaacagcaaaggggaggggcctatgtctctccccactgtctttagcacatccgag
ggagctcctggccgtgtttcaaacttgagatatgagagtccctcggagaccgagatcacg
ctgttctggaaaaaaccccacaaaactaatgggatcttgagaggatacattctactttac
cagaagtttctgaagaacggtaccagcattctacaggcgatccaggtcgacccgaaagag
acacagtacaaaatacacgatctggactcaaagaatttttacatcttcaccctgaaagct
tttactgttgctggagaaggagaatccacccatgttaatgccaccactttactcgacgga
gttccaccaactactgtgaacgcgacagtcggagaaacgtctgtgaatctgagctgggtg
caaggagaacgatatcgaaacatcgggtttacgattcattacctggggaagggcggtcag
tgggaggagtcggagcaggtgaatttgacgcagaccttttatcagctgcagggactgaaa
gcaggaacgccgtaccgcctcgaaattcgccacaacaacataacatactggacacaagac
ctgcagactaatggaccagatgtagacaaggtgcagagcagctttgccacagagggttgg
tttatcggcctcatcagcgccattgtgctgctgctcctcctcctgcttatcctctgcttc
atcaaaaagagcaaaggcggaaaatattcagttaaagataaagaggaaggacagatggac
tcggatgcgaaacccatgaaggatgaagcatttggcgagtacagatcccttgaaagcagc
gacaacgacgagaagcgttcgttcagccagcgatccctgtgtcccgatctgaagcgcgag
agcgacgacagcctggtggaatacggagacagcgtggacatccagttcaacgaggacggc
tcgttcatcgggcagtacagcggccgcagagacacgcagccatacccccacggagagcaa
gagagctcaggggtcccgtcaccaaccaaccccaacatgcaccctccaccgagcggcagc
ttccccacctccgtcaccggcatcctcgggggcaactga
DBGET
integrated database retrieval system
